Gene Hhal_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2315 
Symbol 
ID4709383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2540245 
End bp2540910 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID639856790 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_001003880 
Protein GI121999093 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.501417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA GCGTGACTGA TTCGGCACGC GACAACATGA TCCGCCGCCA GATCCGCCCG 
TGGAACGTGC TCGAGCCGCG GGTGCTGGAG GCACTGGAGG CGATCCCCCG CGAGGATTTC
GTACCCGAGC ACCTGCGCGG GATGGCGTAC AGCGACCTGC AACTGCCGCT GGGCAACGGC
GAGGTGATGA TGGAGCCCCG CCTGGAAGGG CGGATGCTGC AGGAACTGGA CCCGGCACCG
GGCGAGAAGG CGCTGGAGGT CGGCACTGGC AGCGGTTACG TCACCGCCTG CCTGGCCCAC
CTGTGTGGCC ACGTAACCAG TGTCGAGCTG CACGCCGACC TGCACCGACA GGCTCAGCAG
CGGCTCGAGG CCGCCGGGGT AGCCGAGGGC ACCGAGCTGG TCCAGGGCGA TGCCGCCCAC
GGCTGGCATG ATGCCCAGCA CTACGACGTG ATCTCGGTCA CCGGCTCCCT GCCCGAGCTC
CACGACGGCT TCCACAGCTC CCTGACCATC GGCGGCCGGT TGTTCGTCAT CGTCGGTCAG
GGCCCGATGA TGGAGGCCCT GCGCATCACC CGCACGGGCC CCAACGCCTG GTCGACCCAG
AGCGTCTTCG ATACCGCAGT GCCGCCGCTG CGCGGCCTGA CCAAGAGGGA TCCATTCAAG
CTTTGA
 
Protein sequence
MTQSVTDSAR DNMIRRQIRP WNVLEPRVLE ALEAIPREDF VPEHLRGMAY SDLQLPLGNG 
EVMMEPRLEG RMLQELDPAP GEKALEVGTG SGYVTACLAH LCGHVTSVEL HADLHRQAQQ
RLEAAGVAEG TELVQGDAAH GWHDAQHYDV ISVTGSLPEL HDGFHSSLTI GGRLFVIVGQ
GPMMEALRIT RTGPNAWSTQ SVFDTAVPPL RGLTKRDPFK L