Gene Hhal_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2306 
Symbol 
ID4709103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2533230 
End bp2534561 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content71% 
IMG OID639856781 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001003871 
Protein GI121999084 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGC GCAGACTGCT CACCACCCTG CTGCTCGCCA GCCTGGCGCC GCTTGCTGCG 
GCTGACCGCG TGCACCACCA CGAGCTGGAC AACGGCCTGA CCGTTCTAGT CCAGGAGGAC
CACCGCGGCG GCGTGGTCGC CTCCATGCTC TGGTACCACG TCGGATCCGG CCACGAGCAC
CGGCCCATCA CCGGCATCTC CCACGCCGTC GAACACATGA TGTTCAAGGG CACCGAGACC
CGCGAGACCG GTGAGTTCGC CCGACAGATC GCCCGCGAAG GGGGGCAGAC CAACGCCTTC
ACCGCCCGCG ATTTCACCGG CTACTTCCAA CTGCTGGCGG CCGACCGCCT CGAGCTGGCC
ATGGAGCTGG AGGCCGACCG CATGCACCAG CTGGTCTTCG ACCCCGAGGA GTTCCAGCGC
GAGATGCAGG TCATCCACGA GGAACGGCGC CAGCGGGTCG ACGATCCGCC GGAGGCCCGG
GCCTTTGAAC GCTTCACCGC CACCGCCCAT ATGGCCAGCC CCTACCGCCA CCCGATCATC
GGCTGGCAAC GGGACCTGGA CCGCCTGCGC CTGGAGGAGC TCGAGGCGTG GTACCAGCGC
TGGTACACCC CGAGCAACGC CACTCTGGTG GTGGTCGGCG CGGTGGAGCC GGAGCGGGTC
TTCGAACTGG CCGAGCGGCA CTTCGGCGAG GTCCCTGCCC GCGAGGCCGA GCCGCAGCCG
GAGGGCCGCG AGATCGACGC CGCCCCCGGG GAGCGACGCA TTGAGGTCCG TTTCGACGAC
GCCCGCGTGC CCATGCTCTT CCTCGGCTAC AACGTCCCCT CGCTGGCCAC CGCGGCGGAT
CCCGGCGACG CCTACGCCCT GCTGTTGGCG GCCGAGCTGC TCGACGGCGG GCGCTCCGCC
CGCCTGCCGG AGGCCCTGGT GCGCGGCAGC GGGGTGGCCA CCAGCGCCTC GGCGGGCTAT
TCGCCGGTGG CGCGTCTCGA CACCCTCTTC TCGCTGGTGG CACGGCCGGC CGACGACCAA
GACCTGGACG ACCTGGAATC CGCCCTGCGC GAGCAGATCC ACCGGCTCCA GGAGGAGCCG
GTGGCAGACT CGGAGCTGGA GCGCGCCATG ACCCGCCTGT TCGCCGCCGA GGTCTACGCC
CGGGACGCCC CCATGGGCCG CGCGCAGCGA CTGGGGCGGC TGGCCAGCAC GGGCATCGGC
TGGGAAGAGG CGCAGCGTTT CGAGGAGCGG GTTCGCGCCG TCTCCCCGGA GGCCATCCAA
CGTGCCGCCG AAACGTACCT GCAACCGGAG CGGCTCACCG TGGGCCGCCT GCTGCCCGGC
GAGGAGGATT GA
 
Protein sequence
MALRRLLTTL LLASLAPLAA ADRVHHHELD NGLTVLVQED HRGGVVASML WYHVGSGHEH 
RPITGISHAV EHMMFKGTET RETGEFARQI AREGGQTNAF TARDFTGYFQ LLAADRLELA
MELEADRMHQ LVFDPEEFQR EMQVIHEERR QRVDDPPEAR AFERFTATAH MASPYRHPII
GWQRDLDRLR LEELEAWYQR WYTPSNATLV VVGAVEPERV FELAERHFGE VPAREAEPQP
EGREIDAAPG ERRIEVRFDD ARVPMLFLGY NVPSLATAAD PGDAYALLLA AELLDGGRSA
RLPEALVRGS GVATSASAGY SPVARLDTLF SLVARPADDQ DLDDLESALR EQIHRLQEEP
VADSELERAM TRLFAAEVYA RDAPMGRAQR LGRLASTGIG WEEAQRFEER VRAVSPEAIQ
RAAETYLQPE RLTVGRLLPG EED