| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2290 |
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| Symbol | |
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| ID | 4709454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2513410 |
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| End bp | 2515179 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856765 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001003855 |
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| Protein GI | 121999068 |
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| COG category | [C] Energy production and conversion
[K] Transcription |
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| COG ID | [COG0538] Isocitrate dehydrogenases
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC AGATCCAATA CCCCGAGGGC GGCCAGAAGA TCACCGTCGG GTCCGACGGC
CGACTGCAGG TCCCGGACAA CCCGATCATC GGTTACGTTG AGGGCGACGG CATCGGTCCG
GACATCAACC GCGCCTGCAT GCGCATCTGG GACGCCGCGG TGGAGAAAGC CTACGGCGGG
CGGCGCAAGA TCCACTGGGC CGAGCTGTTC ATGGGCGAGA AGGCCGCCGC ACTCTACGAC
GGCGACTACT TCCCGGATGA GACGAAGGCG GCGCTGCGGG ATGTGCTCAT CTCCATCAAG
GGGCCCCTGA CCACGCCGGT AGGCGGCGGT TTCCGCTCGC TGAACGTCTC CCTGCGCCAG
GAGCTGGACC TCTACGCCTG TGTCCGCCCG GTGCGGCACT ACGCCGGCGT TCCCTCGCCG
CTGCAGCGGC CCGAGGACAT CGACGTGGTG ATCTTCCGCG AGAACACCGA GGACGTCTAC
GCGGGGATCG AGTACCAGGC CGGTAGCGCC GACAACGAAA AGGTGGCCCG CTTCCTGCGC
GAGGAGATGG GCGAGGAATT CTTCGACGGC GCCGGCCTCG GCGTCAAGCC GATCAGCCCC
TTCGGCACCA AGCGCCTGGT GCGCAAGGCG ATCGAGTACG CCATTGAGCA CGATCGCGAG
AGCGTCACCC TGGTGCACAA GGGCAACATC ATGAAGTACA CCGAGGGGGC CTTTCGCACC
TGGGGTTACG AGGTGGCCCG CGAGGAGTTC CCCGATCGGA CGATTACCGA GGAGGAGCTC
TACGCCACCT ACGGGGGCAA GCGCCCCGAG GGCAAGATCG TCATCAAGGA CCGCATCGCG
GACATCATGT TCCAGCTGAT GCTGCTGCGG CCCAACGAGT TCGATGTCCT CGCCACCATG
AACCTCAACG GCGATTACCT CTCCGACGCC ATTGCCGCTG AGGTCGGCGG CGTCGGCATT
GCCCCGGGCG CCAACATGTC CGACAACGTG GCGGTGTTCG AGGCCACCCA CGGTACCGCG
CCGAAGTACG CCAACCAGGA CAAGGTCAAC CCCGGCTCGC TGCTGTTCTC GGGCGTCATG
CTGCTCGAAC ACATCGGCTG GAGCGAGGCG GCGGACCTGA TCCGCGCCGC CTACGAGAAG
GTGGTCGGGG CCGGCATCGT CACCTACGAC TTCGCCCGTT CCCTGCAGGG GGCGACCGAG
GTCAAGACCA GCCAGTTCGC CGACGCGCTG ATCGATCAGA TGCACGGCAC CATCGACATC
GACCGCATCC AGCGCGAGCG CGAGGAGGCC ATCGAGGCCG AGCGCCAGGC CCGCGAGCAG
CGCCGGGTGG TGGCCCCGCT CGAGGAGATG GTCGCCTCGG GCCGCGTGCC GCACACGGTG
GCCGACCTGA TGAACCCGAA CCTGGTCACC ATGTCCGGCG ATACCAGCGT CGAGGACGCC
ATGCACCTGA TGCGCGAGCG ACGGATCTCC TCGGTGGTGG TCCAGCCCGC CCCGGACGAG
GCCGAGGGCA TGGGCATCAT GACCCAGCGC GACGTGATCA GCCGGGTGGT CTCGGCCACC
AAGCAGCCGA GCCAGGTGCG CATCTCCGAG GCAGCCACGC GGCCACTGAT CACCGTCCCC
GAGGACACCT CGCTGCTCGA CTGCGCCGAG CGCATGGGGG CGGAGAACAT CCGGCGCATG
GTGGTCATCG ACACCCAGGG TCGGCCGATC GGTATCATCT CCGATACCGA CATCTTCGCC
AGCGTCGAGC AGTTCGGCCT CCCCGAGTAG
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| Protein sequence | MSQQIQYPEG GQKITVGSDG RLQVPDNPII GYVEGDGIGP DINRACMRIW DAAVEKAYGG
RRKIHWAELF MGEKAAALYD GDYFPDETKA ALRDVLISIK GPLTTPVGGG FRSLNVSLRQ
ELDLYACVRP VRHYAGVPSP LQRPEDIDVV IFRENTEDVY AGIEYQAGSA DNEKVARFLR
EEMGEEFFDG AGLGVKPISP FGTKRLVRKA IEYAIEHDRE SVTLVHKGNI MKYTEGAFRT
WGYEVAREEF PDRTITEEEL YATYGGKRPE GKIVIKDRIA DIMFQLMLLR PNEFDVLATM
NLNGDYLSDA IAAEVGGVGI APGANMSDNV AVFEATHGTA PKYANQDKVN PGSLLFSGVM
LLEHIGWSEA ADLIRAAYEK VVGAGIVTYD FARSLQGATE VKTSQFADAL IDQMHGTIDI
DRIQREREEA IEAERQAREQ RRVVAPLEEM VASGRVPHTV ADLMNPNLVT MSGDTSVEDA
MHLMRERRIS SVVVQPAPDE AEGMGIMTQR DVISRVVSAT KQPSQVRISE AATRPLITVP
EDTSLLDCAE RMGAENIRRM VVIDTQGRPI GIISDTDIFA SVEQFGLPE
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