| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2261 |
|---|
| Symbol | |
|---|
| ID | 4709137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2482832 |
|---|
| End bp | 2484265 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639856737 |
|---|
| Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
|---|
| Protein accession | YP_001003827 |
|---|
| Protein GI | 121999040 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCC CGCTGCCCGG TTTCCGCGAT GTCCGGGTCG TCGTCGCCGG CGATCTGATG
CTCGACCGTT ACTGGCATGG GGCGACCCAG CGCATCTCAC CGGAAGCCCC GGTCCCGGTG
GTGCGGGTCG ATGGCGCCGA GGAGCGTCCG GGCGGTGCTG CGAATGTCGC GCTCAATGTG
GCCGCCCTCG GTGGCGAGGC GCAGGTGGTG GGCCCGACCG GCAGCGACGA GGCAGCCGAC
CGGCTGGCGG AGCTGCTCGA GGCTGCTGGT GTTGGCCAGC GATTCCACCG CATCGCCGGC
GCTGACACCA TCACCAAGCT GCGGGTGATC AGTCGACACC AGCAGCTGAT CCGCCTCGAC
TTCGAACGCG GCTTCCCGGG GTTCGACCAC GCCGCCATGC TGGCCCTGCT CGAGCCCGCC
CTGGCCGATG CCGCGGTGCT GGTCCTCTCC GACTACGCCA AGGGGGCGCT CCCCGATCCG
GCCGGGTTGA TCGAGGCCGC CCGCCGAGCC GGGCGGCCGG TGCTGGTCGA CCCCAAGGGG
GCGGACTACC GTCGCTACCG CGGTGCCAGC CTGCTGACGC CCAACCTGGC GGAGTTCGAG
GCAGTGGTCG GGCCGTGCGC CGATGGCGAT GAGATCGCCA AGCGGGCGAG GCAACTGGCG
GCCGATCTGG AGCTGGAGGC GTTGCTGGTG ACCCGGGGCG AGGCTGGGAT GACCCTCGCC
CCGCGGGAGG GGGTGGCGGT GCATCTGCCG ACCCGGGCCC GAGAGGTCTT CGATGTCACG
GGTGCCGGCG ATACGGTGAT CGCCACGCTC GCCGCTGCCC TGGGCGCCGG GGTGGATCTG
GCCGATGCGT CGGCTCTGGC CAACGTGGCC GCCGGAGTCG TGGTGGGCAA GCTGGGGACC
GCCACGGTCA CCCCGGCAGA GCTGGAGGCG GCGCTGGGCG GTGGCCCGGC CCCGGCAGCG
GGTTCCGGGG TGGTGGACGA GCCGGGCCTG TTGGCAGCGG TGCGCCAGGC CCGTGCGGCG
GGCGAACGGA TCGTCATGAC CAACGGCTGC TTCGACCTGC TCCACGCCGG TCATGTCGAC
TACCTGCAGC GGGCCCGCCG GCGCGGCGAG CGGCTGGTGG TGGCGGTCAA CGACGATGCC
TCGGTGGCGC GGCTTAAGGG GGCGGAACGG CCGGTCACGC CCCTGGCGCA GCGCATGGCG
GTGCTTGCCG CCCTGGACAC GGTGGATTGG GTGGTGCCGT TCAGCGAGGA CACCCCGGCG
CGGCTGATCG AGGCGGTGTT GCCGGACCGG CTGGTCAAGG GTGGGGACTA TCAGCCCGAG
CAGATCGCCG GCCACGACGT CGTGGTCGCC GCCGGCGGCT CGGTGGAGGT CCTGCCCCTG
CTCGCCGGCG CATCGACCAC GGACCTGATC GCGCGCATTC GCAGCCGCGG CTAG
|
|---|
| Protein sequence | MTPPLPGFRD VRVVVAGDLM LDRYWHGATQ RISPEAPVPV VRVDGAEERP GGAANVALNV
AALGGEAQVV GPTGSDEAAD RLAELLEAAG VGQRFHRIAG ADTITKLRVI SRHQQLIRLD
FERGFPGFDH AAMLALLEPA LADAAVLVLS DYAKGALPDP AGLIEAARRA GRPVLVDPKG
ADYRRYRGAS LLTPNLAEFE AVVGPCADGD EIAKRARQLA ADLELEALLV TRGEAGMTLA
PREGVAVHLP TRAREVFDVT GAGDTVIATL AAALGAGVDL ADASALANVA AGVVVGKLGT
ATVTPAELEA ALGGGPAPAA GSGVVDEPGL LAAVRQARAA GERIVMTNGC FDLLHAGHVD
YLQRARRRGE RLVVAVNDDA SVARLKGAER PVTPLAQRMA VLAALDTVDW VVPFSEDTPA
RLIEAVLPDR LVKGGDYQPE QIAGHDVVVA AGGSVEVLPL LAGASTTDLI ARIRSRG
|
|---|
| |