| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2245 |
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| Symbol | |
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| ID | 4709500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2458603 |
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| End bp | 2460999 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639856721 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001003811 |
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| Protein GI | 121999024 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.659597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAGTG AGTCGATCCC GCAGCGCATC GCCCAGGAGC TGGGCGTGGG CAACCGGCAA
GTCGAGGCCG CCATCGAGCT GCTCGACGGG GGCGCCACGG TCCCCTTCAT CGCCCGCTAC
CGCAAGGAGG TCACCGGCGG CCTCGACGAC AGCCAGCTCC GCTCGCTCGA GGAACGGCTG
ACCTACCTGC GTGAGCTCGA CGAGCGCAAG GAGACGGTGC TCAAGGCCAT CGACGAACAG
GGCAAGCTCA CCGACGAGCT GGCCGAGGCC ATCCGGACCG CCGAGACCAA GACCCGGGTC
GAGGACCTCT ACCGCCCCTA CCAGAAGAAG CGCCGCACCA AGGCGCAGAT CGCCCGCGAG
GCCGGGCTGG AGCCCCTCGC CGACACCCTC CTCGCCGACC CGAGCCAGGT CCCCGAGGAG
GCGGCGGCGC CCTACGTCAC CGGACCCGCC GAGGAAGGGC AGGAGACCCC GGCCGTGGCC
GATGTCGAGG CCGCCCTCGA CGGCGCGCGG CAGATCCTCA TGGAGCGCTT CGCCGAGGAT
GCCGACCTGC TTGAGGAACT GCGCGACTAC GGCTGGCGCA AGGGCTATCT GGTCAGCCGC
GTGGCCGAGG GCAAAGAGAA GGACGGCGCC CGCTTCCGCG ACTACTTCGA GCACGCCGAG
CCGCTGCGCA AGATCCCCTC CCACCGCGCC CTGGCCATGC TCCGCGGGCA GAGCGAGGAG
ATCCTGCGCC TGGAGATCGC CTGGTCCGAC GCCGAGGCCC GCGGCGAGAG CGACGAGCGC
AGCGTCGGTG AGGCGGCCAT CGCCCGGCGG TTCGCCATCG CCGACCACGG CCGACCGGCC
GACGCCTGGC TGGCGCGCAC CGTTCGCCTG GCCTGGCGGG CGAAACTCTC CACCCACCTC
GACCTGGCCC TCAAGCGCCA GCTGCGCGAG CAGTCCGAAG AGGAAGCCAT CCGCGTCTTC
GGCGCCAATC TGGAGGATCT GCTGCTGGCG GCGCCGGCCG GCCCCAGGCC GACCATCGGC
CTCGATCCGG GGCTGCGCAC CGGGGTCAAG GTCGCGGTCA TCGACGCCAC CGGGGCCGTG
GTCGATACCG CCACGATCCA CCCCTTCACC AGCCGCAACA AAGACCCCGA GGGATCGCTC
AAGAGCCTCG CTGACCTGGC CCGCAAGCAC GAGGTGGGGC TGGTGGCCAT CGGCAACGGC
ACCGCCTCCC GCGAGACCGA CGCCCTGGTC GGTGAGCTGA TCAAGCGCCA CCCGGAGCTG
GGCCTCCACA AGGTGGTGGT CTCGGAGGCC GGCGCCTCGG TCTACTCCGC CTCCGAGCAC
GCCTCGCGAG AACTCCCCGA GCTGGACGTC TCCCTGCGCG GCGCGGTCTC CATCGCCCGA
CGCCTGCAGG ACCCCCTGGC CGAGCTGGTG AAGATCGAGC CCAAGTCCAT CGGCGTCGGT
CAGTACCAGC ACGACGTCAA TCAGAGCCAC CTCGGGCGAA AGCTCGATGC GGTCGTGGAG
GACTGCGTCA ACGCCGTCGG CGTGGACGCC AACACCGCCT CGGCGCCGCT GCTCGCCCGC
GTCTCCGGCC TCGGCCCGGG CCTGGCCGAG AAGATCGTCC AGCACCGCTT CGACAACGGC
CGCTTCCGCA CGCGCAAGGA TCTCCAGGGG GTCCCGCGAC TCGGCCCCAA GGCCTTTGAA
CAGGCCGCCG GCTTCCTGCG CATCCCCCAG GGCGACAACC CGCTGGACGC CTCCGCCGTC
CACCCGGAGG CGTACCCGGT GGTCGAGCGG ATCTGCGCCG AGACCGGCCG GAGCGTGGCC
GATCTGATCG GCGACGAGGG CTTCCTCGGC GGCCTCGACC CGAAGGCGTA CACCGACGAG
CGCTTCGGCG AGCCCACGGT GCGCGACATC CTCGGCGAGC TCGCCAAACC GGGCCGGGAC
CCGCGCCCCG AGTTCCGTAC CGCCGCCTTC CGCGAAGGGG TGGAGAAAAT CCAGGATCTG
GAACCGGGCA TGGTCCTCGA GGGCACGGTG ACCAACGTCG CCAACTTCGG CGCCTTCGTC
GATATCGGGG TCCACCAGGA CGGGCTGGTG CACATCTCCG CCCTCGCCCA CGAATTCGTC
CGCGACCCGC GCGACAAGGT CCGCACCGGG GACGTCGTCC AGGTCAAGGT CATGGAAGTC
GACCTGGAGC GCCAGCGGAT CGGCCTGTCC ATGCGCCTCG ACGACGACCC CAACGCCCAG
GCCGAGGGGG GCCGCAAGGG GGCCAATGGC AAGGGCGCCT CGGCCGCCCG GGGCAAGGGC
GATGGCTCCG GCAACAAGGC GACCGGGCGC GGATCGAAGA AGGGCAAGAA GCAGGAAAAG
GCCGAACCCG CCACCGCCAC AGCGCTGGCC GAGGCCTTCC GCAAGGCCCG CTCCTGA
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| Protein sequence | MVSESIPQRI AQELGVGNRQ VEAAIELLDG GATVPFIARY RKEVTGGLDD SQLRSLEERL
TYLRELDERK ETVLKAIDEQ GKLTDELAEA IRTAETKTRV EDLYRPYQKK RRTKAQIARE
AGLEPLADTL LADPSQVPEE AAAPYVTGPA EEGQETPAVA DVEAALDGAR QILMERFAED
ADLLEELRDY GWRKGYLVSR VAEGKEKDGA RFRDYFEHAE PLRKIPSHRA LAMLRGQSEE
ILRLEIAWSD AEARGESDER SVGEAAIARR FAIADHGRPA DAWLARTVRL AWRAKLSTHL
DLALKRQLRE QSEEEAIRVF GANLEDLLLA APAGPRPTIG LDPGLRTGVK VAVIDATGAV
VDTATIHPFT SRNKDPEGSL KSLADLARKH EVGLVAIGNG TASRETDALV GELIKRHPEL
GLHKVVVSEA GASVYSASEH ASRELPELDV SLRGAVSIAR RLQDPLAELV KIEPKSIGVG
QYQHDVNQSH LGRKLDAVVE DCVNAVGVDA NTASAPLLAR VSGLGPGLAE KIVQHRFDNG
RFRTRKDLQG VPRLGPKAFE QAAGFLRIPQ GDNPLDASAV HPEAYPVVER ICAETGRSVA
DLIGDEGFLG GLDPKAYTDE RFGEPTVRDI LGELAKPGRD PRPEFRTAAF REGVEKIQDL
EPGMVLEGTV TNVANFGAFV DIGVHQDGLV HISALAHEFV RDPRDKVRTG DVVQVKVMEV
DLERQRIGLS MRLDDDPNAQ AEGGRKGANG KGASAARGKG DGSGNKATGR GSKKGKKQEK
AEPATATALA EAFRKARS
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