Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2239 |
Symbol | |
ID | 4709504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2454182 |
End bp | 2455054 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856715 |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | YP_001003805 |
Protein GI | 121999018 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0272421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTC TCGTCGACCA GAGCACCCGG GTGCTCGTGC AGGGGTTCAC CGGCAAGCAG GGGACCTTCC ACGCGGAGCA GGCCATCGCC TACGGCACAC AGGTGGTCGG CGGCGTGACC CCGGGGCGGG GCGGCGGCAC CCACCTGGAT CGCCCGCTGT TCAATACCGT CCGCGAGGCG GTCGCAGCGA CCGGCGCCGA CGCCTCGGTG ATCTACGTCC CGGCCCCCTT CGCCGCCGAC GCCATCCTCG AGGCCGCCGA CGCCGGGATC CGGGTGATCG CCTGCATCAC CGAGGGCATC CCGGTGCTGG ACATGCTGCA CGTCAAGGAG GCCCTGCGGG GCGAAGACGT GGCGCTGATC GGGCCCAACT GCCCCGGGGT CATCACCCCG GATGCGTGCA AGATCGGCAT CATGCCCGGG CACATCCACC TGCCCGGGCG GATCGGCATC GTCTCCCGCT CGGGGACCCT GACCTACGAG GCGGTCAAAC AGACCACGGA CATCGGCCTG GGGCAGTCCA CCTGTGTCGG CATCGGTGGC GACCCGATCC AGGGGATGTC GTTCGTCGAC TGCCTGGAGC AGTTCGAGGC CGACCCGCAC ACCGACGGGG TGGTCATGGT CGGTGAGATC GGCGGCAGCG CCGAGGAGGA GGCCGCCACG TTCATCCGCG ACCACATGAG CAAACCGGTG GTCGCCTACA TCGCCGGGGT GACCGCGCCG CCGGGCAAGC GCATGGGTCA CGCCGGGGCC ATCATCTCCG GCGGCAAGGG GACGGCGGAT GACAAGTTCG CCGCCCTGGA GGCGGCCGGG GTGGCCACCG TGCGCTCGCC GACCGAGATC GGCGAGCGCA TCCGGCGGCT GGTGGCGGGC TGA
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Protein sequence | MSILVDQSTR VLVQGFTGKQ GTFHAEQAIA YGTQVVGGVT PGRGGGTHLD RPLFNTVREA VAATGADASV IYVPAPFAAD AILEAADAGI RVIACITEGI PVLDMLHVKE ALRGEDVALI GPNCPGVITP DACKIGIMPG HIHLPGRIGI VSRSGTLTYE AVKQTTDIGL GQSTCVGIGG DPIQGMSFVD CLEQFEADPH TDGVVMVGEI GGSAEEEAAT FIRDHMSKPV VAYIAGVTAP PGKRMGHAGA IISGGKGTAD DKFAALEAAG VATVRSPTEI GERIRRLVAG
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