| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2231 |
|---|
| Symbol | |
|---|
| ID | 4709167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2444646 |
|---|
| End bp | 2445518 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639856707 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001003797 |
|---|
| Protein GI | 121999010 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA CGCACACTGC TCCCCGCCCC ACCGTGCTGA TCACCGGCTG CTCCAGCGGC
ATCGGCGCCG CCGCGGCACA GCACATGGCC CGGCGCGGCT GGCGGGTCTT TCCGACGGCA
CGCCGGCACG AGGACGTGGA CCGGCTCCGT GAGGCCGGCT GGGATGACGC CCTGGCGCTG
GACCTGACCG ACAGCACCTC GATTGCCAGC GCGGTCCACG AGGTGGCGAC GCGCACCGGC
GGGCGCCTCG ACGCGCTGTT CAACAACGGC GCCTACGGCC AACCGGGAGC GGTGGAGGAC
CTCTCCCGGG CGACCCTGCG CGAGCAACTC GAGACGAACC TGCTGGGCAC CCACGAACTG
ACCACGCAGG TGCTGCCACT CATGCGCAGC CAGGGCCACG GGCGCATCGT GCAGAACAGC
TCGGTGCTCG GCTTCATCGC CCTGCCCTAC CGGGGCGCCT ACGTCTGCTC GAAGTTCGCC
CTGGAGGGGC TCACCGACAC GCTCCGCCAG GAACTGGTCG GCAGCGGCAT CCACGTCAGC
CTGATTCAGC CCGGGCCGAT CGCCAGCCGT TTTCGCGACA ACGCCCACCG CGCCTTCCGC
GCTCGCATCG ACGCCGAGCA CAGCGCCCAC GCCCCCACCT ACCAGGCCGT CGAACAGCGC
CTGGCGGGCG CCGGCGCCTC GACGCCGTTC ACCCTGGAGG CCGGGGCGGT GGCGGCCAAG
CTGGCCCACG CCCTGGAGCA TCCGCGCCCC AAGGCCCGCT ACCACGTCAC CGTGCCCACC
CATCTGTTCG CGGCCCTCAA ACGCCTCCTG CCCACCCGGT GGTTGGACCG GGTCTTGCTG
GCGGCCACGG CCTCGGAACG CCGCCCCGGC TAA
|
|---|
| Protein sequence | MDDTHTAPRP TVLITGCSSG IGAAAAQHMA RRGWRVFPTA RRHEDVDRLR EAGWDDALAL
DLTDSTSIAS AVHEVATRTG GRLDALFNNG AYGQPGAVED LSRATLREQL ETNLLGTHEL
TTQVLPLMRS QGHGRIVQNS SVLGFIALPY RGAYVCSKFA LEGLTDTLRQ ELVGSGIHVS
LIQPGPIASR FRDNAHRAFR ARIDAEHSAH APTYQAVEQR LAGAGASTPF TLEAGAVAAK
LAHALEHPRP KARYHVTVPT HLFAALKRLL PTRWLDRVLL AATASERRPG
|
|---|
| |