Gene Hhal_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2178 
Symbol 
ID4711299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2389535 
End bp2390878 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content65% 
IMG OID639856653 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_001003744 
Protein GI121998957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCA CGATCTTCGG CAGCGGCTAC GTGGGTCTGG TTACCGGGAC CTGCTTCGCC 
GATGCCGGCA ACGACGTTGT CTGTGTCGAT ATCGACGCGG AGCGCGTCGC GCAGTTGCAG
CGCGGTGAGG TCCCCATCTA CGAGCCGGGG CTCGACGAGA TGCTCTCCTT CAACCAGGAG
GAGGGGCGGC TGCGCTTTAC CACCAATGCC GCCGAGGGGG TGCACCACGG CCTGTTCCAG
TTCATCGCCG TGGGCACGCC TTCGGACGAG GATGGCTCGG CGGACCTGCA GCATGTACTC
GCTGTGGCCC GGACCATCGG CCAGCACATG GATGACTACC GGGTGGTCGT CGATAAGTCC
ACCGTGCCCG TGGGCACCGC GGACCGGGTG CGCGCCGCGG TGGGCGAGGA GCTGGCCGCC
CGCGGCGAGC AGCTGGAGTA CGACGTCGTC TCCAACCCTG AGTTCCTCAA GGAAGGGGCG
GCCATCGACG ACTTCGTCAA GCCCGACCGC ATCATCATCG GCAGCGACAA CCCGCGCACC
GGCGAGCTCA TGAAGGCGCT CTACGCGCCG TTCAATCGTA GCCACGACCG GCTGATCGCC
ATGGATGTGC GCTCTGCGGA GCTGACCAAG TACGCCTCCA ATGCCATGTT GGCGACCAAG
ATCAGCTTCA TGAACGAGCT CTCCAACCTG GCCGAGCGCC TGGGTGCCGA TATCGAGCAG
GTACGGGTGG GGATGGGGTC GGATCCGCGC ATCGGCTACC ACTTCATTTA TCCGGGGTGT
GGCTACGGCG GCTCCTGCTT CCCCAAGGAT GTCAAGGCGC TGACCCACAC GGCGCACGAG
TACGGGTATC AGCCCGAGTT GCTCGAGGCG GTGGAGAGCG TCAACGCCCG GCAGAAGCAG
GTGCTGGTTC ATCGTCTGCA CGCACACTTT GGCGAGGACC TGGGCGGGCG GACCTTCGGG
CTCTGGGGGT TGGCCTTCAA GCCGAACACC GACGACATGC GTGAAGCCCC CAGTCGTGTC
GTCATGGAGG CGCTCTGGGA AGCCGGGGCG CGGGTCCAGG CCTACGACCC CGAGGCGATG
GACGAGGCCG AACGGATCTA CGGCAACCGG CAGGATCTGG AACTCTGCGA CAACCTCTAC
GACGCCGTGG AGGACGCCGA CGCGCTGATC GTCTGTACCG AGTGGCAGGT CTTCCGCAGC
CCCGACTTCG AGCGCATCCG GGACGCGCTG CGCCAGCCGG TGGTCTTCGA TGGGCGCAAT
GTCTACCCGC CTTCGATGAT GGAGGCGCTC GGTTTTACCT ACTACGGTAT GGGCCGGGGC
GAGAGTATTC GTCGCCCCCT CTGA
 
Protein sequence
MKVTIFGSGY VGLVTGTCFA DAGNDVVCVD IDAERVAQLQ RGEVPIYEPG LDEMLSFNQE 
EGRLRFTTNA AEGVHHGLFQ FIAVGTPSDE DGSADLQHVL AVARTIGQHM DDYRVVVDKS
TVPVGTADRV RAAVGEELAA RGEQLEYDVV SNPEFLKEGA AIDDFVKPDR IIIGSDNPRT
GELMKALYAP FNRSHDRLIA MDVRSAELTK YASNAMLATK ISFMNELSNL AERLGADIEQ
VRVGMGSDPR IGYHFIYPGC GYGGSCFPKD VKALTHTAHE YGYQPELLEA VESVNARQKQ
VLVHRLHAHF GEDLGGRTFG LWGLAFKPNT DDMREAPSRV VMEALWEAGA RVQAYDPEAM
DEAERIYGNR QDLELCDNLY DAVEDADALI VCTEWQVFRS PDFERIRDAL RQPVVFDGRN
VYPPSMMEAL GFTYYGMGRG ESIRRPL