| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2027 |
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| Symbol | |
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| ID | 4710376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2230020 |
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| End bp | 2232821 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856500 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001003593 |
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| Protein GI | 121998806 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.942365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAG CCATCGCCAA ACGCGTCTTC GGAACCCGTA ACGATCGTGC GCTGAAGCGT
CTGCGCAAGC GGATCGAGGC CATCAACGCG CACGAGCCGG AGCTGCAGAA GCTCTCCGAC
GAGCAGCTCC AGGCCAAGAC CGATGCGTTC AAGGCGCGGC TCGCGCAGGG CGAAACCCTC
GACGACCTGC TCGAGGAGGC GTTCGCGGTG GTGCGCGAGG CTTCACGGCG GGTGTTGGGA
CTGCGCCACT TCGATGTCCA GCTGCTCGGC GCGATGGTCC TGCACGACGG CAACATCTCC
GAGATGAAGA CCGGTGAGGG GAAGACTCTG GTGGCCACCC TGGCGGTCTA CCTCAATGCC
CTGACCGGTC GCGGTGTCCA TGTGGTGACC GTCAACGACT ACCTGGCCCG GCGCGACGCC
GAGTGGATGG GCCGGCTGTA CCGCTTCCTG GGCATGGAGG TGGGTGTGGT GGTGCCGCGC
CAGCCCCGCG AGGAGAAGGT CGCCGCCTAC CAGGCCGACA TCACCTACGG CACCAACAAC
GAGTTCGGCT TCGACTATCT GCGCGACAAC ATGGCCTTCC GCAAGGAGGA CAAGGTCCAG
CGGGACCTGT ACTACGCGCT GGTCGACGAG GTCGACTCCA TCCTCATCGA CGAGGCCCGC
ACCCCGCTGA TCATCTCGGG CCCGGCGGAG CAGGCCGGCG AGCTCTACGA GGCCATGTCC
CGCCTGGTGC CCCGCCTGCA GGCGCAGAAG CCCGAGGAGC GCCCCGAGGA GAACCCGGAA
CTGGGGCCGG GGGATTACTA CGTCGATGAG AAGGCTCGCC AGGTCTACCT CACCGAGGGC
GGGCACGACC GGGCCGAGGA GCTCCTGCGC GAAGAGGGGC TGATCGGGGA GAACGACTCC
CTCTACGACG CTCGCAACAT CAACGTGGTC CACCACCTGA ACGCGGCGCT GCGGGCCCAC
ACCCTCTACG AGCGCGATGT CCACTACCTG ATCCGCGACA ACCAGGTGGT CATCGTCGAC
GAGTTCACCG GCCGCGCCAT GCCCGGCCGG CGCTGGTCCG AGGGGTTGCA CCAGGCGGTG
GAGGCCAAGG AGGGGCTGCC CATCCAGGCC GAGAACCAGA CCCTGGCCTC GATCACCTTC
CAGAACTACT TCCGCCTCTA TGACAAGCTC GCCGGCATGA CCGGTACCGC GGATACTGAG
GCCTTCGAGT TCCAGCACAT CTACGGGCTG GAGGTGCTCT CCATCCCCAC CCACCGGCCG
ATGGTCCGCG ACGACGCCCA CGATCTGGTC TATCGGACGG CGGACGAGAA GTACGAGGCG
ATCATCGCCG ACATCCGCGA CTGCGTGCAG CGCGACCAGC CGGTGCTGGT GGGCACCACC
TCCATCGAGG CCTCGGAGCG CCTCTCCAAG GCACTGAAGG ACGCCGGCGT GGAGCACAAC
GTGCTCAACG CCAAGCACAA CGAGAGTGAG GCGCAGATCA TCGCCGATGC CGGCCGTCCG
GGTACCGTCA CCATCGCCAC CAACATGGCA GGCCGCGGGA CGGACATCGT TCTCGGCGGC
AACCTGGACC AGGAGCTGGC CGAGCTCGGC GAGGACCCGG ATCCCGCCGA GGTCGAGCGG
CGCAAGGCCG AGTGGCAGGA CCGCCACGAC CGGGTGGTCA ACGCCGGCGG TCTGCACGTT
ATCGGCACCG AGCGCCACGA GTCGCGGCGC ATCGACAACC AGCTGCGCGG GCGTTCCGGC
CGCCAGGGCG ACCCGGGCTC GTCGCGTTTC TACCTGTCGC TGGAGGACTC GCTGCTGCGC
ATCTTCGCCT CCGAGCGCAT GTCCGGGATG CTCGAGAAGC TCGGCATGCA GCACGGTGAG
GCCATCGAGT CGGGCATGGT TTCGCGGGTG ATCGAGAACG CCCAGCGCAA GGTCGAGGCG
CACAACTTCG ACATGCGCAA GCACCTGCTG GAGTTCGACG ACGTCGCCAA TGACCAGCGC
AAGGTCGTCT ACGAGCAGCG CAACGAGCTC CTCGAAGCCG ACGATGTCGC CGAGACCGTC
GATGCCATCC GCCAGGACGT GGTGGAGAAG GTCATCTCCG AGCACATCCC GCCCGGGTCC
ATCGACGAGC AGTGGGACGT CCCCGGCCTG GAGCGCACCC TTAAGGAAGA GTTCGGCCAG
GAGCTTCCCA TCCAGCGCTG GCTCGACGAT GAGGACGATC TCCACGAGGA GACCCTGCGC
GAGCGCATCC AGGGCGAGAT CGAAAAGGCC TACCGGGCCA AGGAGGCCGA GGCCGGTGCC
AGTGTGGTGC GTCACTTCGA GAAGGCGGTG ATGCTCCAGG TCCTGGACAA GCACTGGAAG
GAGCACCTGG CCGCCATGGA TTACCTGCGA CAGGGGGTGG GGCTGCGCGG CTACGCCCAG
CGCAACCCGA AGCAGGAGTT CAAGAAGGAC GCCTTCGCCA TGTTCCAGGA GATGCTCGAG
GGCCTGAAGC GGGACGCCGT CGGCGTGCTG CTGCGCGTCC AGGTTCGTGC CGAGGAGGAC
GTGGAGGCCG TCGAGGAGCA GCGTCGCCAG GAGGCGGAGC GCATGCAGAT GCGCCACGCC
GCACCGGCCT CCGCCGCGGC GGGGGCTGTC GCAGCGGGTA GTGGTGCCGC CGGGGCAGCC
GCAGCCGAGG GGGACAGCGC GCCGACCGGC GGGGCCCAGC AGCAGTCCGC CGGTGGCCGA
GGGCAGGAGA CGGTGGCCCG GGAAGGCCCG AAGGTCGGGC GCAACGAGTC GTGCCCCTGC
GGCTCCGGCA AGAAGTACAA GCACTGCTGC GGGAAGCTCT AA
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| Protein sequence | MFSAIAKRVF GTRNDRALKR LRKRIEAINA HEPELQKLSD EQLQAKTDAF KARLAQGETL
DDLLEEAFAV VREASRRVLG LRHFDVQLLG AMVLHDGNIS EMKTGEGKTL VATLAVYLNA
LTGRGVHVVT VNDYLARRDA EWMGRLYRFL GMEVGVVVPR QPREEKVAAY QADITYGTNN
EFGFDYLRDN MAFRKEDKVQ RDLYYALVDE VDSILIDEAR TPLIISGPAE QAGELYEAMS
RLVPRLQAQK PEERPEENPE LGPGDYYVDE KARQVYLTEG GHDRAEELLR EEGLIGENDS
LYDARNINVV HHLNAALRAH TLYERDVHYL IRDNQVVIVD EFTGRAMPGR RWSEGLHQAV
EAKEGLPIQA ENQTLASITF QNYFRLYDKL AGMTGTADTE AFEFQHIYGL EVLSIPTHRP
MVRDDAHDLV YRTADEKYEA IIADIRDCVQ RDQPVLVGTT SIEASERLSK ALKDAGVEHN
VLNAKHNESE AQIIADAGRP GTVTIATNMA GRGTDIVLGG NLDQELAELG EDPDPAEVER
RKAEWQDRHD RVVNAGGLHV IGTERHESRR IDNQLRGRSG RQGDPGSSRF YLSLEDSLLR
IFASERMSGM LEKLGMQHGE AIESGMVSRV IENAQRKVEA HNFDMRKHLL EFDDVANDQR
KVVYEQRNEL LEADDVAETV DAIRQDVVEK VISEHIPPGS IDEQWDVPGL ERTLKEEFGQ
ELPIQRWLDD EDDLHEETLR ERIQGEIEKA YRAKEAEAGA SVVRHFEKAV MLQVLDKHWK
EHLAAMDYLR QGVGLRGYAQ RNPKQEFKKD AFAMFQEMLE GLKRDAVGVL LRVQVRAEED
VEAVEEQRRQ EAERMQMRHA APASAAAGAV AAGSGAAGAA AAEGDSAPTG GAQQQSAGGR
GQETVAREGP KVGRNESCPC GSGKKYKHCC GKL
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