Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1978 |
Symbol | |
ID | 4710451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2180091 |
End bp | 2181041 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639856451 |
Product | lysine--tRNA ligase |
Protein accession | YP_001003544 |
Protein GI | 121998757 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGCCG GCGGTCCGTG CGGCGCCGCC GACGGCGCCA CCGTGCGCCG GGTCGGTCAG AAGCTGGCAC GGATCCGCGG CTTCTTCGCC GAGCGCGGGG TGGTGGAGGT GCAGCCGCCG TGCCTCGGCC CGGCGGCCAT GGACCCGGCG CTGGAGAGCA TCCCGGTGCC CGGGGCGGCC GCCGACGGCG ACGCCGCCTA CCTGCAGACC TCCCCGGAAT CGGCGATGAA GGCTATGCTC GCCGCCGGCA GCAGCGACAT CTACTACCTC GGGCCGGCCT GGCGGGGCGG TGAGCGCGGG CGCTGGCACG CCACCGAGTT CACGCTGCTC GAGTGGTACC GCATCGGCTT CGACCACCAC CGGCTGATGG ACGAGGTGTC GGCGCTGGCG GCGCTGCTTG TCGGTGATCG CCCGGTCGAG CGCTGGTCCT ACCAAGAGGC CTTTCGCCGT TACGCCGGTG TTGATCCCTT GGACGACGCG GATGACGCAC TCCGCGACGC TCTGGCGGAC CAGGGCATCG ATCTGCACGG GGCCGCCCCG AGCCGCGATG ACGCGCTCGA TCTGCTGCTC TCCCACGCCG TGGGGCCGGC CCTGGGCCAC GGCCAGTTGA CCTTTCTCTA CGGGTTTCCG GCGAGCCAGG CGGCCCTGGC CCGCCTTGAC GACGCTGACC CGCGCACTGC GCGGCGTTTC GAGTGCTTCA TCGACGGCCT GGAGATCGCC AACGGCTACC ACGAACTCAC CGACCCCGCC GCGCAGCGGG CGCGCTTCGA GGCCGAGCAG GCCGAGCGCC GCGGCGCCGG GCAGCCGGTG TACGACCTCG ACGAGCGGCT GCTCGGCGCC CTGGAGCGCG GTGTACCCGA CTGCGCCGGG GTGGCGCTGG GCGTCGACCG GCTGCTGGCG GTGGCGCTGG GGGCAGAGTC GTTGGCGGCG GTGCGGGGTT CGGGCGGCTA A
|
Protein sequence | MAAGGPCGAA DGATVRRVGQ KLARIRGFFA ERGVVEVQPP CLGPAAMDPA LESIPVPGAA ADGDAAYLQT SPESAMKAML AAGSSDIYYL GPAWRGGERG RWHATEFTLL EWYRIGFDHH RLMDEVSALA ALLVGDRPVE RWSYQEAFRR YAGVDPLDDA DDALRDALAD QGIDLHGAAP SRDDALDLLL SHAVGPALGH GQLTFLYGFP ASQAALARLD DADPRTARRF ECFIDGLEIA NGYHELTDPA AQRARFEAEQ AERRGAGQPV YDLDERLLGA LERGVPDCAG VALGVDRLLA VALGAESLAA VRGSGG
|
| |