Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1940 |
Symbol | |
ID | 4710612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2139158 |
End bp | 2140117 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639856413 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001003506 |
Protein GI | 121998719 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.386829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAATCC GGGCATGGCG CTCTAGCGCG CTGGGTACTA CCGGAGCAAC CGCCTGCGCC CTGGCCTTCA CGCCGGCGCT GGCAGCCGAT GAGCTGTTCA TCCCCGAGGC CGAGCCGGTG GCCGACGGAG TTTACGCCAT CATCGGACCG ACGGACGCAC GCACCTACGA GAACCACGGC ATGAATGCCA ACTACGGCAT CGTCGAGACC GATGAGGGCG TGCTCCTCAT CGACTCCGGG CCGACCGCCT TCAGCGCCGA GCTGATCGAG GAGGCGGTGG CCGAGGTGAC CGACACACCG ATCCGCTGGG TGTTGAACAT CGGCGTCCAG GACCACCGCT GGCTGGGCAA CGACTACTTC CAGCGCGAGC ACGACGCCGA GGTCATCGCC TTCGAGGAGA CGGCACGCCA GCAGGAGGCG TTCGCCTCGG ACCACCTGGA GGGCCGGCTG AAGGAGGCCG TCGGGGACCG TCTGGAGGGG ACCGAGCCGG CCTATGCCGA CCGCGAGCTC GAGGGCGAAG AGTCGACGCT GGAGCTCGGC GGCGTCACCT TCGAGCTGCA GCGCACCGAT GCCCACTTCC CCGGCGACGC CATGGCCCAC CTGCCCGAGG CCGACGTGGT GTTTACCGGC GACCTGGTCT ATGTCGACCG CATGCTCGGC GTCCACCCGT GGTCGAGCGT TGAGAACGGC TACGAGGCCT ACCAGGAACT GGCGGACCTC GGCCCCGAGA CGGTGGTGCC GGGCCACGGA CAGGTCAGCG ACATGGAACG GGTCGAACGG GACACCGGCG CCTACTACGA GTTCCTCGTC CATGAGGTGG GTGCCGCCGC CGAGGATCTC GAGCCCCTGG ACGAGGTAGT GGAACGACAC CGCGAGGAGT CGGCCTTCCA GCACCTGGAG CATTTCGACG GCTGGCACAC CACCAACATC AACCGCGCCT ACCTGGAGTT CGAGTGGTAG
|
Protein sequence | MTIRAWRSSA LGTTGATACA LAFTPALAAD ELFIPEAEPV ADGVYAIIGP TDARTYENHG MNANYGIVET DEGVLLIDSG PTAFSAELIE EAVAEVTDTP IRWVLNIGVQ DHRWLGNDYF QREHDAEVIA FEETARQQEA FASDHLEGRL KEAVGDRLEG TEPAYADREL EGEESTLELG GVTFELQRTD AHFPGDAMAH LPEADVVFTG DLVYVDRMLG VHPWSSVENG YEAYQELADL GPETVVPGHG QVSDMERVER DTGAYYEFLV HEVGAAAEDL EPLDEVVERH REESAFQHLE HFDGWHTTNI NRAYLEFEW
|
| |