Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1814 |
Symbol | |
ID | 4711045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1987564 |
End bp | 1988667 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856284 |
Product | chorismate synthase |
Protein accession | YP_001003380 |
Protein GI | 121998593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGGA ATACCTTTGG CACCCTGTTT ACGGTCACCA CCTTTGGTGA GAGTCACGGC CCCGCGCTGG GCGGCGTGGT GGACGGCTGC CCGCCGGGGC TGGCCCTGAC CGAGGCCGAC CTGCAAGTCG AGCTCGATCG GCGTCGGCCC GGGCGCTCCA AGCACACCAC GCAGCGCCGC GAGAGCGATC AGGTGCAGAT CCTCTCCGGG GTCTTCGAGG GGGTGACCAC CGGCACCCCC ATCGGTCTGC TCATCGAGAA CACCGACCAG CGTTCCAAGG ATTACTCCGA GATCGCCCAG CGGTTCCGGC CTGGGCACGC CGACTACACC TATCAGCAGA AGTACGGGGT TCGCGATTAC CGCGGCGGCG GCCGTTCTTC GGCTCGGGAG ACCGCCGTGC GGGTGGCCGC CGGGGCCATC GCCCGCCGCT ACCTCGCCCA GCGTCTCGGT ATCGAGATCC GCGGGCGGCT GGCCCAGATG GGTGGGATCG AACTCGGCGC CGAGGACTGG TCGGCGGTGG ATGACAACGA CTTCTTCTGC GCCGACCCGG CGCGCATCCC GGAGCTCGAG GCCCTGATCC AAGAGGTGCG TAAGGCTGGC GATTCGGTGG GCGCTGCCGT CGAGGTCGAG GTCCGCCATG TGCCGCCGGG GCTCGGCGAG CCGGTCTTCG ACCGTCTGGA TGCCGACCTG GCCAAGGCGC TGATGTCCAT CAACGCCGTC AAGGGGGTGG AGGTCGGCGC CGGCATGGCG GCGGCAGGGC AGCGGGGCAG CGCCCATCGC GACGAGCTCA CCCCCGCGGG ATTCGCCGGC AACCAGTCCG GCGGGGTGCT CGGCGGGATC TCCAGCGGAC AGGATCTGGT GGTGCGGGCG GCGCTGAAGC CGACCTCGAG CATGCTCATC CCGGGGCGCT CGGTGGACGT GCACGGCGAG CCGGTCTCGG TGGTGACCAA GGGGCGCCAC GATCCGTGTG TCGGTATCCG TGCGGTGCCC ATCGCCGAGG CCATGGCGGC GCTGGTGGTG ATGGACCACT GGCTGCGGCA TCGGGCACAG AACGCCGATG TCGAGTCCGG GACCCCGGTG CTGCCCGCCC GCGACCGGGA GTAA
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Protein sequence | MSGNTFGTLF TVTTFGESHG PALGGVVDGC PPGLALTEAD LQVELDRRRP GRSKHTTQRR ESDQVQILSG VFEGVTTGTP IGLLIENTDQ RSKDYSEIAQ RFRPGHADYT YQQKYGVRDY RGGGRSSARE TAVRVAAGAI ARRYLAQRLG IEIRGRLAQM GGIELGAEDW SAVDDNDFFC ADPARIPELE ALIQEVRKAG DSVGAAVEVE VRHVPPGLGE PVFDRLDADL AKALMSINAV KGVEVGAGMA AAGQRGSAHR DELTPAGFAG NQSGGVLGGI SSGQDLVVRA ALKPTSSMLI PGRSVDVHGE PVSVVTKGRH DPCVGIRAVP IAEAMAALVV MDHWLRHRAQ NADVESGTPV LPARDRE
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