Gene Hhal_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1814 
Symbol 
ID4711045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1987564 
End bp1988667 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID639856284 
Productchorismate synthase 
Protein accessionYP_001003380 
Protein GI121998593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGGA ATACCTTTGG CACCCTGTTT ACGGTCACCA CCTTTGGTGA GAGTCACGGC 
CCCGCGCTGG GCGGCGTGGT GGACGGCTGC CCGCCGGGGC TGGCCCTGAC CGAGGCCGAC
CTGCAAGTCG AGCTCGATCG GCGTCGGCCC GGGCGCTCCA AGCACACCAC GCAGCGCCGC
GAGAGCGATC AGGTGCAGAT CCTCTCCGGG GTCTTCGAGG GGGTGACCAC CGGCACCCCC
ATCGGTCTGC TCATCGAGAA CACCGACCAG CGTTCCAAGG ATTACTCCGA GATCGCCCAG
CGGTTCCGGC CTGGGCACGC CGACTACACC TATCAGCAGA AGTACGGGGT TCGCGATTAC
CGCGGCGGCG GCCGTTCTTC GGCTCGGGAG ACCGCCGTGC GGGTGGCCGC CGGGGCCATC
GCCCGCCGCT ACCTCGCCCA GCGTCTCGGT ATCGAGATCC GCGGGCGGCT GGCCCAGATG
GGTGGGATCG AACTCGGCGC CGAGGACTGG TCGGCGGTGG ATGACAACGA CTTCTTCTGC
GCCGACCCGG CGCGCATCCC GGAGCTCGAG GCCCTGATCC AAGAGGTGCG TAAGGCTGGC
GATTCGGTGG GCGCTGCCGT CGAGGTCGAG GTCCGCCATG TGCCGCCGGG GCTCGGCGAG
CCGGTCTTCG ACCGTCTGGA TGCCGACCTG GCCAAGGCGC TGATGTCCAT CAACGCCGTC
AAGGGGGTGG AGGTCGGCGC CGGCATGGCG GCGGCAGGGC AGCGGGGCAG CGCCCATCGC
GACGAGCTCA CCCCCGCGGG ATTCGCCGGC AACCAGTCCG GCGGGGTGCT CGGCGGGATC
TCCAGCGGAC AGGATCTGGT GGTGCGGGCG GCGCTGAAGC CGACCTCGAG CATGCTCATC
CCGGGGCGCT CGGTGGACGT GCACGGCGAG CCGGTCTCGG TGGTGACCAA GGGGCGCCAC
GATCCGTGTG TCGGTATCCG TGCGGTGCCC ATCGCCGAGG CCATGGCGGC GCTGGTGGTG
ATGGACCACT GGCTGCGGCA TCGGGCACAG AACGCCGATG TCGAGTCCGG GACCCCGGTG
CTGCCCGCCC GCGACCGGGA GTAA
 
Protein sequence
MSGNTFGTLF TVTTFGESHG PALGGVVDGC PPGLALTEAD LQVELDRRRP GRSKHTTQRR 
ESDQVQILSG VFEGVTTGTP IGLLIENTDQ RSKDYSEIAQ RFRPGHADYT YQQKYGVRDY
RGGGRSSARE TAVRVAAGAI ARRYLAQRLG IEIRGRLAQM GGIELGAEDW SAVDDNDFFC
ADPARIPELE ALIQEVRKAG DSVGAAVEVE VRHVPPGLGE PVFDRLDADL AKALMSINAV
KGVEVGAGMA AAGQRGSAHR DELTPAGFAG NQSGGVLGGI SSGQDLVVRA ALKPTSSMLI
PGRSVDVHGE PVSVVTKGRH DPCVGIRAVP IAEAMAALVV MDHWLRHRAQ NADVESGTPV
LPARDRE