Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1788 |
Symbol | hisS |
ID | 4710917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1961847 |
End bp | 1963118 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639856258 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001003354 |
Protein GI | 121998567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGAACA AGGGGATTCA AAGCATTCGC GGGTTCTCGG ATATCCTTCC GGAAGAAAGC CCGTTGTGGC AGTACGCCGA GTCGGCGATT CGTCGGGTCC TGGAGTCGTA CGGGTACCGC GAGATCCGTC TGCCGGTGCT CGAACGCACC GAGCTCTTCA GCCGGTCCAT CGGCGAGGTG ACCGACATCG TCGAGAAGGA GATGTACACC TTCGACGATC GCAATGGCGA CAGCGTTACG CTGCGCCCTG AGGGCACGGC CGGCTGTGTC CGGGCCGGGA TCCAGTCCGG CTTGCTGCAC AATGCCGAGC CGCGGCTGTG GTACGCCGGC CCGATGTTTC GCCATGAACG CCCGCAGAAG GGGCGGCTGC GGCAGTTCCA CCAGGTCGGC GCCGAGGTCT TCGGCATCCC GGAGCCCGAG CTGGATGCCG AGATGATCAT CATGACCGCG CGTATGCTGC GCGAGTTGGG GCTTTCCGAC GTGCGGCTGC AGCTCAACTC GTTGGGTACC CCCGAGAGCC GTGCGGCGCA CCGCGAACAG CTGGTGGCCT ACCTGCGCCG CCACGAGGAC CGCCTGGACG AGGATGCGCG GCGGCGTCTG GAGACGAATC CGCTGCGGAT CTTCGACAGC AAGAACCCGC AAGTGCAGCA GGTCATGGCC GATGCGCCCC GCCTGATGGA CTGTCTCGAC AGCGTCTCGG CGGAGCACTT CACCGTGGTC CGGAACCTGC TGGAGCGGGC CGGCGTCGAA TACGAGGTGA ACCCGTCGCT GGTGCGGGGG CTCGATTACT ATACGCGCAC GGTCTTCGAG TGGGTGACGG ATCGCCTGGG GGCGCAGGGT ACCGTCTGTG CCGGTGGGCG TTTCGACGGT CTGGTCGAAC AGCTCGGCGG TCGGCCGACT CCGGCGATCG GCTTCGCTCT GGGGCTGGAG CGGTTGGTCG CGCTGCTTGA GGATCAGGGT ACCCCGGGGC AGGGTGGGGC GCCCCACGCC TACCTGGTGG TGGCTACCGA GGCCGGGGCC GGGCTGGAGA TGGCCGAGGC CCTGCGGGAC GCGCTGCCGG CGTTGCGGGT ACAGATGCAC GCGGGCGGAG GCGGTTTCAA AGCGCAGCTC AAGCGTGCCG ATCGCAGCGG CGCCCGCGTG GCCCTGATCC TTGGCGATGA TGAGCAGGCG GCCGGGGCGC TGACGATCAA GGATCTGCGT GGCGAGGATG GGCAGCAACG GCTGCCCTTG GACGACGCGG TGACGTATCT GCGAGGGCTG ATCGGGGCGT AG
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Protein sequence | MSNKGIQSIR GFSDILPEES PLWQYAESAI RRVLESYGYR EIRLPVLERT ELFSRSIGEV TDIVEKEMYT FDDRNGDSVT LRPEGTAGCV RAGIQSGLLH NAEPRLWYAG PMFRHERPQK GRLRQFHQVG AEVFGIPEPE LDAEMIIMTA RMLRELGLSD VRLQLNSLGT PESRAAHREQ LVAYLRRHED RLDEDARRRL ETNPLRIFDS KNPQVQQVMA DAPRLMDCLD SVSAEHFTVV RNLLERAGVE YEVNPSLVRG LDYYTRTVFE WVTDRLGAQG TVCAGGRFDG LVEQLGGRPT PAIGFALGLE RLVALLEDQG TPGQGGAPHA YLVVATEAGA GLEMAEALRD ALPALRVQMH AGGGGFKAQL KRADRSGARV ALILGDDEQA AGALTIKDLR GEDGQQRLPL DDAVTYLRGL IGA
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