Gene Hhal_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1722 
Symbol 
ID4709288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1888752 
End bp1890140 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content64% 
IMG OID639856190 
Productmagnesium transporter 
Protein accessionYP_001003288 
Protein GI121998501 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAATCG ATTTAGCTGC CGCTCCGGCG GACCCAGGCG TCTACGATGA ACGCAAACGC 
CGCTTGGTCG AGACCTTCAC CAAACTCTAC CTGCGCGGAT CCTGGCGCCC CCTGGAACGA
CTGATCCGCC GTCTGCACGC CGCCGATGCA GCCGCCGTGC TGGTCGAGCT GCCGGTGCCG
CAGGTGGTGG ATACGCTCCA GGCGGTGAGC GATCTGCGCC ACGCTGCGCA GATCGTCAAC
AAGATGCCGC TGGCGATACG GCACCAGATC GTTGAGGCGC TACCGCACAA GGACCTGGCC
GAGTTGCTGG AAAACTTCCG GCCGGACGAC CTGACCGACC TGATCCAGGC TCTGCCCGAT
GAGCAGCGCG ACCATCCGCT GTCCGCCCTG GATGCGGAAA GTCGCAGCGA GCTCGATACC
CTGCTGGCCC ACGATCCGGG CAGCGCCGGC GGCATCATGA CTACGGAGTT TTTCTCGTTG
CCCGAGGCGT GCACGGTGCA GGAGGCGATC GAGGCCCTGC GCGGTTACGC CGACGCGGAG
ATGGTCTTCT ACCTGTTCCT GACCGGAGAG GAGGGGCGGC TGACCGGCGT CATCTCGCTG
CGTCAACTCC TGCTCGCGCC GAGCGATGCT CAAGTGGCAG ATGTGATGAG CGGCCGGGTG
ATCCGCGTAC GCACCGACAC CGAGGAGGAG CAGGTCTCCC GGCTCTTCGA CAAGTATCGC
CTACTGGCTT TGCCCGTGGT CGACGACAAC GACGTGCTGG TCGGCATCAT CACCGTTGAC
GACATCATCG ATGTGATCGG CGAATCGACC ACCGAGGACA TGCTGCGCAT GGCCGGTACT
CGCCAGTCGG AGATGCTGAC CGATTCGGTG TTCCGCATTG CCGGCGTGCG GCTGCCGTGG
TTGTTCGCCG CCTTCCTCGG TGGGCTCGGT GCCACCGCAG TCATCGGGCA GTACGAGGAG
GTGCTTGCCC AGGTTATCAT CCTCAGTGCC TTCGTCCCGA TTATCATCGG CATGGCGGGC
AATGTCGGGG TGCAGTCGGC CACCGTGACG GTGCGCGGTT TGGCTACCGG GGCGATCAAC
CCCCGCGATA CCTTGGTTAT GGTCTTCAAG GAGCTACGGG TGGGTCTGCT GCTGGGCGCC
TTCTACGGCG TGATCCTGGC TGCCTACGGC TTCTGGGTGT ATGACAGCCT TCAACTCGGA
CAGGTCGTCG GCCTCACCAT CCTGACCAAT ATGACCGGTG CCGCGCTGCT GGCGGTCTCG
CTGCCCATGC TATTCGTCCG GTTGAAGGCC GATCCCGCCG TGGCTACGGG CCCCTTCGTG
ACCACGGCGA TCGACGTACT CGGGGTGCTG AACTACTTCG CCATCGCTTC CCTGATCTAC
GGCCTGTAG
 
Protein sequence
MQIDLAAAPA DPGVYDERKR RLVETFTKLY LRGSWRPLER LIRRLHAADA AAVLVELPVP 
QVVDTLQAVS DLRHAAQIVN KMPLAIRHQI VEALPHKDLA ELLENFRPDD LTDLIQALPD
EQRDHPLSAL DAESRSELDT LLAHDPGSAG GIMTTEFFSL PEACTVQEAI EALRGYADAE
MVFYLFLTGE EGRLTGVISL RQLLLAPSDA QVADVMSGRV IRVRTDTEEE QVSRLFDKYR
LLALPVVDDN DVLVGIITVD DIIDVIGEST TEDMLRMAGT RQSEMLTDSV FRIAGVRLPW
LFAAFLGGLG ATAVIGQYEE VLAQVIILSA FVPIIIGMAG NVGVQSATVT VRGLATGAIN
PRDTLVMVFK ELRVGLLLGA FYGVILAAYG FWVYDSLQLG QVVGLTILTN MTGAALLAVS
LPMLFVRLKA DPAVATGPFV TTAIDVLGVL NYFAIASLIY GL