Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1714 |
Symbol | |
ID | 4710188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1875113 |
End bp | 1877134 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639856181 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001003280 |
Protein GI | 121998493 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.712235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCC GATGGAAGCT CGGTACGGGG TTCGGTCTGG TCATCGGTCT GGCCGGTGCT TTGGGTGCCG TGGCGGTATG GCAGTTGGGG ACCATTGACG ACCACGCTAC GGAGCTCCGC GAGGAGGTGT TGCCCGAGCT GCTGGCGGCA CGGCAGATCG AGGCATATGT GCAGCAGAGC GCCGAGCGCT GGCAGGAGTA CGGTCTGACC CACCAACCCG AGGCTGCGGA GCGGGCCGCA GAGGCCCACG ATGCGGCCGT AGCGCAGATC GAGCAGGTGC GAGCCGGCAG TCACGGGCGC ATGGCCGAGT TTGCCGAGCG CGCCGAGGCC GCCATGGGGG CCTACCGCGA TGCCACCGAT GCCACGGAGG ATGCCGTGGG GCGGTTGCGG GAGGAGCGGG ACGGGCTGAT GCGCTCAGCT ACCATCGCCC TGGAAGAGAC GCAGTACCTG CTGGATGAGC AGCGTGAGCG GGTCGAGGAC GCCCAGGCGG CGGATTTCCG GGCGCCCGCC GGGCAGAGCG CTGCCGACGT ACGCACCCGC CGGTTGCAGG ATCTCTCGCG CCTGAACGAG ATCCGCGTGG TTACCGGGGA CATCCACCGT GCCGCCCTGC AGTCTCTGGA AACCCGCGAT CCGATACGGC TGCAGGGCGC CCTGCCGGGG TTCGGGCAGG TCCAGGTGCA CTTCAGTATC CTGCGCGCCA ACGCCGCTGA CGAGCAGGAG CAACAGATCC TCGAGGAGAT CAACGACGCG ATTATCGAGT ACCAGGATTA CGCCACCGGA CTGGCCGAGG CGCAGGAGGC GCTGGCCGAG CTGCGCCATG TGCGGGCCGA GACCAGCGAG CAGGCCCTCG GGGCGGTGGT GGATCTGGCC AATCATACCG CCGAGAATGG CGAGCGGGCC AGTGAGGGGG TCGTCGGCGT GGTCCGCGAG GCCGGGGCGA CCCTGGGCAT CGGGCTGTTT CTGGTCGGCC TCCTGGCCTT CGGTATCGCG GCGTGGACCA CGCGATCACT GACCCAGCCG CTGGGCCAGC TGGTCCATGG CCTGCGCGAC ATCGCCGAGG GTGAGGGCGA CTTGACCCGC CGGGTCGACG AGCGCCGGGC CGATGAACTG GGTGACGTTG GCTATTGGTT CAACCGCCTG ATGGATCGGA TCCACGGCAT GATCGTGCAG CTCTCCGGGG CGAGCCGGGA TGTCACCGAC GGCGTTGCGC GGATTGCCGC TAGCAATGCC CAGATCGAGT CGGGCATGAC CGAGCAGTCG GATCAGACGC AGCAGGTCTC CAGCGCCATC GAGGAGATGT CGAGTTCGAT CCACGATGTC TCGCGCCAGA CCAGCGAGGC GGCTAGTGCG GCGGTGCAGG CCGGGGAGAC GGCCGCCGAT GGTCGAGAAA CGGTCCAAGG TCTGGTGACC CGGATGCAGG AGGTCGCCGC CAGCGTCGAG CGTGCCGGCG AGGCGGTGAC CGCCCTTGGA CACAGTGGCG AGCAGATCGG CGAGATCATC TCGATGATCG ACGGCATCGC CGAACAGACC AACCTGCTCG CTCTCAATGC TGCCATCGAG GCGGCCCGTG CCGGTGAGCA GGGGCGCGGT TTCGCCGTGG TTGCCGACGA AGTACGCTCC CTGTCCCAGC GGACGGTGGA TGCCACACAG CAGGTGTCCG AGGCGCTGCA GCAGATCCAG GAGCGCACCG ACACCGCCGT GCAGGGTATG CAGCAGAGTT CCGGGCAGGT CAACGACGGT CTGGGGCAGG CCGAGGCCGC CGGGGCGGCC CTGCAACGAA TTGTCGAGAA GGCACAGAGC GTCGCCGAGA ACGTGCAGTC CATCGCGACG GCCGCCGAGC AACAGTCGAA TGTCGCCGCC GAGATCGCGC AGAATGTGGA TGCGGTCAAT CAGGTCACCC AGCAGACCAG CGGCGGCGTC AACCAGGCCG CGCAGACCGC CCAGCAGCTG CGGCGTGAGG CCGAGGCCCT GCAGGAGTTG GTGCAGCAGT TCAAGGTGAC AGAGGGTGGC CCGTCATCGT GA
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Protein sequence | MRIRWKLGTG FGLVIGLAGA LGAVAVWQLG TIDDHATELR EEVLPELLAA RQIEAYVQQS AERWQEYGLT HQPEAAERAA EAHDAAVAQI EQVRAGSHGR MAEFAERAEA AMGAYRDATD ATEDAVGRLR EERDGLMRSA TIALEETQYL LDEQRERVED AQAADFRAPA GQSAADVRTR RLQDLSRLNE IRVVTGDIHR AALQSLETRD PIRLQGALPG FGQVQVHFSI LRANAADEQE QQILEEINDA IIEYQDYATG LAEAQEALAE LRHVRAETSE QALGAVVDLA NHTAENGERA SEGVVGVVRE AGATLGIGLF LVGLLAFGIA AWTTRSLTQP LGQLVHGLRD IAEGEGDLTR RVDERRADEL GDVGYWFNRL MDRIHGMIVQ LSGASRDVTD GVARIAASNA QIESGMTEQS DQTQQVSSAI EEMSSSIHDV SRQTSEAASA AVQAGETAAD GRETVQGLVT RMQEVAASVE RAGEAVTALG HSGEQIGEII SMIDGIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRS LSQRTVDATQ QVSEALQQIQ ERTDTAVQGM QQSSGQVNDG LGQAEAAGAA LQRIVEKAQS VAENVQSIAT AAEQQSNVAA EIAQNVDAVN QVTQQTSGGV NQAAQTAQQL RREAEALQEL VQQFKVTEGG PSS
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