Gene Hhal_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1698 
Symbol 
ID4709890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1854567 
End bp1854938 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID639856165 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001003264 
Protein GI121998477 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATGG ACTTCTTCAT CTCGCCCGCC CACGCCCAGC AAGCAGGCGG TGGGGGCGAT 
ATGCTGTTCT TTCTGATCTT CACCGTCCTG TTGGTGGCGG TCTTCTACTT CCTGCTGATC
CGGCCGCAGC GCCAGCGCAT GAAGCAGCAC CAGCAGATGG TCGAGGGTCT TGCCGAGGGC
GACGAGGTCG TGACCAGCGG GGGCGAGCTG GGCCGTATCA CGCGCCTGGG TGAGCAGTTC
GTGCGCGTCG AGGTGGCCAA AGGCGTCGAG TGGAGCGTCA AGCGCGACAT GATCGGCCAC
GTCCTGCCCA AGGGGACCTT GGACGAGGCC CGCGGCGGCA AGGGCCACGC TCCGACCGAA
TCCACTGAGT GA
 
Protein sequence
MLMDFFISPA HAQQAGGGGD MLFFLIFTVL LVAVFYFLLI RPQRQRMKQH QQMVEGLAEG 
DEVVTSGGEL GRITRLGEQF VRVEVAKGVE WSVKRDMIGH VLPKGTLDEA RGGKGHAPTE
STE