| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1692 |
|---|
| Symbol | |
|---|
| ID | 4710036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1846822 |
|---|
| End bp | 1848102 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639856159 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001003258 |
|---|
| Protein GI | 121998471 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCAATA TCATCGACCG GCGCCGCAAT CCGAAGGGCA AGAGCCTGGC CAACCGCCAG
CGTTTTCTCC GGCGTGCCAA GCGCCAGGTT CTCGATGCAG TCAACGAGGC CTCCGGCCGG
CGCAAGGTGA CCGACGTGGC CGGCGGGGAG CAGATCACGA TCCCCGCCGA CGGGCTCCAC
GAGCCGAGCT TTCGCAAGGC GCCCGATCGC GGGGTGCGTG AGCACGTGGT CCCTGGTAAC
AAGGAGTACG TGGTCGGCGA TACCATCTCG CGCCCCGAGG GGCAGGGGGG TAGCGGGGGG
CGCGAGGGTA GCCCCGATGG CGAGGGGGAG GACGAGTTCA CCTTCGCCGT CAGTCGCGAC
GAGTTCCTCG ATCTCTTCTT CGAGGGGCTG GAGTTGCCGG ATCTGGTCAA GCGCCAGGTG
AAGAAGACCG AGCAGTACAC CCAGCAGCGG GCAGGGTACT CGGTCAGCGG CTCCCCTTCG
AACCTCAACG TCGAGCGGAC CATGCGCAAT TCCCTGTCGC GGCGCATCGC CCTGCGTCGG
CCGAAGGGGG AGGACCTGCA GGCACTGGAT GAGGAGATCG ACCGCCTGGA GCGTTCCGGA
GCTGAGCCCG AGCGGCTGCG TGAGCTCATC GAGCTACGCC GGAACAAGCA GGAGCGGTCC
CGGGCCATCC CGTACATCGA TCCGGTGGAT ATCCGTTACA ACCGCTTCGA CCACGTCCCG
CAGCCGATCT CCCAGGCGGT CATGTTCTGC CTGATGGACG TCTCGGGCTC CATGACTGAA
GAGATGAAGG ATCTGGCCAA ACGGTTCTTC ATGCTCCTCT ACCTCTTCCT CGAACGCCGC
TATCGGCATG TGGATATCGT CTTTATCCGC CACACCCATA TCGCCCAGGA GGTTGACGAG
GACACCTTCT TCTACTCCCG CGAGACCGGT GGGACGCTGG TCTCCCCGGC GCTGGCGATG
ATGCGCGACA TCGTTGACGA TCGTTATCCG GTCCAGGACT GGAATATCTA CGGAGCGCAG
GCCTCGGACG GCGACAACAC CCCGGCGGAC AATCCGGCCA CCACGCGGTT GATGGCCGAC
GGCATCCTCC CGCTGTGCCA GTACTTTGCC TACATCGAGG TGGGGGGTGG GCAAGCCTTC
CACGTGCCGT CCGATTTGTG GCGAGCCTAC GATCGCTTGG CTCGGGGGGA GTCGCCCCTG
GCCATGCGGC GGGTACAGAC CCGTGGCGAC ATCTTCCCGG TCTTCCGGGA TCTCTTTACG
CCGGCTGAGC TGAAGGCCTG A
|
|---|
| Protein sequence | MVNIIDRRRN PKGKSLANRQ RFLRRAKRQV LDAVNEASGR RKVTDVAGGE QITIPADGLH
EPSFRKAPDR GVREHVVPGN KEYVVGDTIS RPEGQGGSGG REGSPDGEGE DEFTFAVSRD
EFLDLFFEGL ELPDLVKRQV KKTEQYTQQR AGYSVSGSPS NLNVERTMRN SLSRRIALRR
PKGEDLQALD EEIDRLERSG AEPERLRELI ELRRNKQERS RAIPYIDPVD IRYNRFDHVP
QPISQAVMFC LMDVSGSMTE EMKDLAKRFF MLLYLFLERR YRHVDIVFIR HTHIAQEVDE
DTFFYSRETG GTLVSPALAM MRDIVDDRYP VQDWNIYGAQ ASDGDNTPAD NPATTRLMAD
GILPLCQYFA YIEVGGGQAF HVPSDLWRAY DRLARGESPL AMRRVQTRGD IFPVFRDLFT
PAELKA
|
|---|
| |