Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1632 |
Symbol | |
ID | 4709090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1779454 |
End bp | 1780881 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639856097 |
Product | PUCC protein |
Protein accession | YP_001003198 |
Protein GI | 121998411 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.369944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGATT CCGCGTCTCT GCTCAAGGCG CGTCTGCGCC GTTTAGCTGT CCCGTTTGCC GAGGTCGGCA CCCGGGAACT CCCCATGACG CAAATCCTGC GTCTGTCCCT GTTCCAGGTC ACCGTGGGCA TGATTTACGT CATGTTCACG GGGACCCTCA ACCGTGTGAT GATCCACGAG CTGGGTATCG CAGCGTCCCT GCTTGGCGCG GTGATCGCCT TGCCGATCCT GTTCGCGCCC CTGCGCCTGC TCATCGGGCA CCGTTCGGAC CATCGCCGCT CGGCCCTGGG GTGGCGTCGG GTACCGTATC TGTGGATTGG CACGCTATTG ATGTTCGGCG GCCTGGCGGT GATGCCCTTC GGCCTGTTGG TACAGTCCGA GTATGGCGCT GATGCGCCGT TCCTCGCCTC CCTGGGGGCG GCGCTGGCCT TCTTCCTGTC CGGCCTGGGT GTGCACGTCA CCCAGACGAC CGGTCTGGCA CTGACGAACG ATCTGGCCCC CGAGGGGAAG CTGCCCCAGG TGGTCGGCGT GATGTACGTC ATGCTGCTGG TCGGCATGGT GATCTCCACC GGTGTGTTCT ATGTGCTGCT CGCCGATTTC AGCCACGAGC GCTTGGTGCA GGTGCTCCAG GGCGCGGCGC TGGTGATCTG GGCGCTGAAT GTGTTTGCGC TGTGGCGGCA GGAGCCGCGG GACCCGGAAC GCAGCCGCGT CGATCGACCG CGTCCACCGC TAAGCGAGTC GTGGCAAAGT TTCATGCAGA GGGGTCCGGT GGTTCGCCTG CTGGTGGTAA CCGGCATCGG TGCGGCCGGC TTCGGGATGC AGGACATCAT CATCGAGCCC TACGGGGCTG CGGTCCTGGG TCTGGAGGTC GCCGGCACCA CGCTGCTGAC CGGGTTGTGG GCGATCGGCA TGCTCATCGG CTTCTGGTTC GCCAAGATGG CCCTTGAGCG CGGACTCAAC GCCTACGGCG CGGCGACCAT CGGTGCCCTG GTTGGCGTGC TGGCGTTTTC GCTGGTGATC GTCTCGGCAC CCCTCGACTC GCCGACGATC TTCCGGGTCG GGCAGGTCGG GATCGGGGTC GGAGGGGCCC TGTTCTACGT CGGGACGCTC GCCGCAACGA TGTCGATGGC GACGCGCGAG CAGAGCGGCA TTGCCATCGG CGCGTGGGGT GCAGTGCAGG CGACCGTGCT CGGTGCCGCA CTGGCCATCG GGGCCGGGAT CTCCGATCTG GTTCCGGCTC TGGCCGAGGC CGGCAGATTG CCGGAGTTGT TCCTGCACCC GGCGGCAGGG TACAGCGTGG TCTATTCGGC GGAGATCGTG CTGCTGCTCG CCATGGTCGT CGCGGCGTGG CCGCTGGCGC GGTTTACAAG AGAGGGGGAG AGTAACGTAT CGCCGTCGAC AGCAACGTCC AACGAGTCGG GTTACTAG
|
Protein sequence | MTDSASLLKA RLRRLAVPFA EVGTRELPMT QILRLSLFQV TVGMIYVMFT GTLNRVMIHE LGIAASLLGA VIALPILFAP LRLLIGHRSD HRRSALGWRR VPYLWIGTLL MFGGLAVMPF GLLVQSEYGA DAPFLASLGA ALAFFLSGLG VHVTQTTGLA LTNDLAPEGK LPQVVGVMYV MLLVGMVIST GVFYVLLADF SHERLVQVLQ GAALVIWALN VFALWRQEPR DPERSRVDRP RPPLSESWQS FMQRGPVVRL LVVTGIGAAG FGMQDIIIEP YGAAVLGLEV AGTTLLTGLW AIGMLIGFWF AKMALERGLN AYGAATIGAL VGVLAFSLVI VSAPLDSPTI FRVGQVGIGV GGALFYVGTL AATMSMATRE QSGIAIGAWG AVQATVLGAA LAIGAGISDL VPALAEAGRL PELFLHPAAG YSVVYSAEIV LLLAMVVAAW PLARFTREGE SNVSPSTATS NESGY
|
| |