Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1603 |
Symbol | |
ID | 4709313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1744480 |
End bp | 1745568 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639856068 |
Product | photosynthetic reaction center subunit cytochrome c |
Protein accession | YP_001003169 |
Protein GI | 121998382 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.199827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTA AAATGTATCT GAACCGATCC TTGGCAGTTG GTGCCCTGTC CGCCGGCCTC GCGGTCGTCG TGGGGTGCGA GCGCCCCCCG GTGGACTCCG AGCAGAAGGG GTACCGTGGC ACCGGCATGG AAGAGGTCAC CAACCCGCGG CTGCGGGACG ATGACCTCCA CCTGGCGCCG GAGGCGGCGG ACCCGGTCTC GGCCGAGGGC CCCAAGGCTG GCGAGATCTA CCAGAACGTC GAGGTGCTCA CCGACCTGAG CGTCGCCGAG TTTACCCGGC TCATGCAGAG CATGACCGAC TGGGTGGCGC CGGATGAGGG ATGCACTTAT TGCCACGACG GCAACGACTT CGCCAGCGAG GAGCTGTACA CGTACCAAGT CTCTCGGCAG ATGATCGAGA TGAATCGGTA CGTGAACGCC AACTGGGAAA GCCACATGGA TGACACGGGC GTGACCTGCT ACACGTGTCA CCGTGGCGAG AATCTGCCGG AGGAGAGCTG GTTCGCCGAG CCTGAGCTGG ATTTCAACGT CCATGGGCTT GGCAACGACC AGATGCAGAA CCTGGCCAGC GAGAAGGTGG GGTTCACCTC GCTGCCGCGG AACGTGTTCG AGCGCTATCT GCTTGGCCAC GACGATCTGC GGGTCGAGGG TGACACGATT CTCCCCAACC TGGACGAGTG GGACGTCTCG CTGCAGGACA CCGAGGCCTC CTACGGCCTG ATGATGCATA TGTCCGACGC GACCGGCTCC AACTGCACCA CGTGCCACAA TACCGGCCGT CTGGGGCAGT GGGACGAGAG CCCGGTGGAG CGGGAGATCT CCTGGCACGG CATCCGGATG ACGCGTGACA TCAACGCCAA CTGGATGGAG CCGCTGGAGG CTGGTCAGCC CGACGTCCGC CTGGGGCCGA CTGGTGACAT CGCCAAGGTC CAGTGCGCCA CCTGCCACTA CGGTGAGCAG CTGCCGCTGG ACGGGGCCAA GATGGTCGAT GACTATCCGG GCCTGATGGG CGAGGAGGAC GAGGACTTCG ACTTCCTGCA GTTCGGTGAT CTCGGCACGG AGGGTCTCCG CGACCGCGAC GCCGAGTAA
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Protein sequence | MSSKMYLNRS LAVGALSAGL AVVVGCERPP VDSEQKGYRG TGMEEVTNPR LRDDDLHLAP EAADPVSAEG PKAGEIYQNV EVLTDLSVAE FTRLMQSMTD WVAPDEGCTY CHDGNDFASE ELYTYQVSRQ MIEMNRYVNA NWESHMDDTG VTCYTCHRGE NLPEESWFAE PELDFNVHGL GNDQMQNLAS EKVGFTSLPR NVFERYLLGH DDLRVEGDTI LPNLDEWDVS LQDTEASYGL MMHMSDATGS NCTTCHNTGR LGQWDESPVE REISWHGIRM TRDINANWME PLEAGQPDVR LGPTGDIAKV QCATCHYGEQ LPLDGAKMVD DYPGLMGEED EDFDFLQFGD LGTEGLRDRD AE
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