| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1558 |
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| Symbol | |
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| ID | 4710777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1693726 |
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| End bp | 1695144 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639856022 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001003124 |
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| Protein GI | 121998337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.238347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTTC GTGACATCGT CTTCGGCACC ATCCTGATCT CCAGCCTGCC GCTGATCTTA
TACAGGCCCT GGATCGGGCC GCTGATGTGG TACTGGGTGG GCTTTTTTAA TCCGCACCAG
CAGGCGTGGG GGTTCTTTGC CGGTGCTCAG GTCGCACTCC CCGTCGCTAT CGCGACCCTC
GCAGCCACCG CCTATACCCA GGAGAAGCGC TGGCCACCGA TGACTCGGGA GATGTGGCTG
GTCTTCCTTC AGGTCATCCT GTTCACGGTG ATTACGTTCG GCTTCGCCTG GCTCCCGGAT
GACGCGTTCG GGCTCTGGGA TCAGCGGATG CGCATCATCT TGATGACCGT CATCACGGTA
ATACTGATCT ACGGGAAGCA GCGCGTCATG GCGCTGCTGG CCATGATCAC CCTGTCCATC
GCCTACTTCG GCTTCAAGGG CGGCCCCTAT ACGCTCAGCA CCGGATTCGG GGGGATGGTA
CTCGGGCCAC AGGGAACGTT CATCGGCGGC AATACCGATA TCGGCCTGGC TCTGGTGATG
ATCCTGCCTC TCACCTTAAT CCTCGCCCGC CAGGTCTATC ACGGGCGTTT CGAACTCCCG
ATCCGCATCC CCGGCTTCGA AACCTGGCAC CGGCTGATTG GGCTCGCCCT CTACGGCGGC
TTCTGGATGA CCCTGATCTC GATCATTGGG ACCCAGTCCC GCGGTGCCTG GGTAGCCCTG
GCATGCACCT GGCCGTTCAT CTTCTGGCGC CTGCGCTTCA AGTGGGCCCT GGTCGCCGCC
GTCGTCCTCG CGGTTGGGGT CATCGGAGTC ACGGTCCCGG ACCGCGTGGC CCACGAGTGG
CAGACCCTTG TCGAATACGA GGACGACGGG TCCGCACAGG GCCGATTCCA CGCGTGGGAT
GTGGCTTGGA ACATTGGGGT GGAGCACCCG CTGACCGGTG CCGGCTTTGG TGCCCAACGC
ATCGACGCCG AGCTATGGCG CTCCTACAGT AGCGATGGTG ATGGCAGCCC GCTCGCACAG
CACAGCATCT ACTTCCAGAC GCTGGCCGAG AACGGATTCC TGGGGCTCGG GCTGTTCCTG
GCACTACTTG GCTTTACGCT GCTCACCCTG AACCGTCTGC GTCGCGACGC CGCTCAGCAC
CCGGATACGC TCTGGATCAG CGAGTGGTCG TGGGCCCTCG CCATCGGCCT GATCGGTTAC
TGCGTCGCGG GGGCCTTCTT GAGCCTCGCG TACTTCGACC TGATGTACGC CTTTATCGCC
CTAGCCATCA TCCTGCGCCG AGAATTTGAG GATGTCCGGG TCGCGGTACG GTACCCCAGC
CCGACCACCG CCACAGCACC ACAACAAACG CCGGTGGGCG AAGTCGGCTA TCGTCCGGGT
ACTCCGCCGC GTGCCCTCTA TCGACGCCCC CCTGCATAA
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| Protein sequence | MDLRDIVFGT ILISSLPLIL YRPWIGPLMW YWVGFFNPHQ QAWGFFAGAQ VALPVAIATL
AATAYTQEKR WPPMTREMWL VFLQVILFTV ITFGFAWLPD DAFGLWDQRM RIILMTVITV
ILIYGKQRVM ALLAMITLSI AYFGFKGGPY TLSTGFGGMV LGPQGTFIGG NTDIGLALVM
ILPLTLILAR QVYHGRFELP IRIPGFETWH RLIGLALYGG FWMTLISIIG TQSRGAWVAL
ACTWPFIFWR LRFKWALVAA VVLAVGVIGV TVPDRVAHEW QTLVEYEDDG SAQGRFHAWD
VAWNIGVEHP LTGAGFGAQR IDAELWRSYS SDGDGSPLAQ HSIYFQTLAE NGFLGLGLFL
ALLGFTLLTL NRLRRDAAQH PDTLWISEWS WALAIGLIGY CVAGAFLSLA YFDLMYAFIA
LAIILRREFE DVRVAVRYPS PTTATAPQQT PVGEVGYRPG TPPRALYRRP PA
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