Gene Hhal_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1539 
Symbol 
ID4710857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1673911 
End bp1675044 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID639856006 
Producthypothetical protein 
Protein accessionYP_001003108 
Protein GI121998321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCGCT GGCCGCTTAA TCCTGCTCAC GCGCTCGGAC AAGGCCTGGC CTGGCCTGAG 
ACCCTGGCCG GCTTTCCGGA GTCGCTGTGG ACGGGGATCC TGGCCGTGGG GCGTGAGAAC
CTCTTGCTCG GGGCGTTGTG GCACCGTGCG GTGAGCTGTG GGGTCGAAGG GCAGTTGCCG
GAGTGGGTGG CCGGGCATCT GTGGGGTGCG GCAGCAACTG CCGAGACCAA CGCCGCGGCG
CTTCGGTGGG AGTTGCAACA GCTCGACCGC GGGGTGTTGC GGCGGTTCAC TGCTCCGGTC
GCCTTGAAGG GGGGCGCCTA CCTGCTGGCG GGATTGCCGA ATGCGGCCGG GAGGATCGTG
GCGGATATCG ATCTGTTGGC ACAAAAGGCG GAGGTCGAGC GAGTCGAGTC GGCCCTGTTC
TATGAAGGGT GGGCGGGGAC CCACCACGAC GCCTACGATC AGCGTTACTA CCGGCAGTGG
ATGCACGAGC TCCCGCCTCT GCAACACCGC AAACGCGGGA CCACGCTGGA TCTGCACCAT
AACATCTTGC CCGAGACCTT CGCCGTGGTC GTCGATCCGG CCCCCATCTT TGAGCACGCC
GCCCCCGCTC CGGGGCTGCA CTGGCTGCGG CTGCCGGCGC CCCGGCACTT GGTACTCCAC
GCCATCGTCC ACCTGTTCTC GGAAACCGAT TGGGACCGCG GATTGCGGGA TCTTTACGAC
ATCCATAGCC TGCTTGAGCA CTTCCATCAG CAGCACGGCG ACCGGTTCTG GGAGGCGCTG
CTCGACGAGG CCGAGGCCAT GCGGCTGCTC TGGCTGGTGG AGCCGGCCGT CTGGTGCTGC
CGGCGGCGCT TCGGTACCCC AGTCCCGCAG GCGGCAGTGG AGCGCCTGAG TCACCACACC
CCCGGGTTTT TGGGCAAGCG TATTGTGCGG CCTGCGTTCG AGCACGCGCT GAACGGCCAT
CTCTCCACGA CGCCGAGAGC CGATGCCCTG GCGCGAGGCC TGATGCTTGT CCGTGGCCAC
TGGCTGAAGA TGCCGCCTTG GCTACTGGTT CGTCACCTGT TCTACAAGGC CTTCCGCGCA
CCCCGGGATC TGGATGCCGA GGCGGCGCAG ATGGATCCAC AACAGCACGG ATGA
 
Protein sequence
MTRWPLNPAH ALGQGLAWPE TLAGFPESLW TGILAVGREN LLLGALWHRA VSCGVEGQLP 
EWVAGHLWGA AATAETNAAA LRWELQQLDR GVLRRFTAPV ALKGGAYLLA GLPNAAGRIV
ADIDLLAQKA EVERVESALF YEGWAGTHHD AYDQRYYRQW MHELPPLQHR KRGTTLDLHH
NILPETFAVV VDPAPIFEHA APAPGLHWLR LPAPRHLVLH AIVHLFSETD WDRGLRDLYD
IHSLLEHFHQ QHGDRFWEAL LDEAEAMRLL WLVEPAVWCC RRRFGTPVPQ AAVERLSHHT
PGFLGKRIVR PAFEHALNGH LSTTPRADAL ARGLMLVRGH WLKMPPWLLV RHLFYKAFRA
PRDLDAEAAQ MDPQQHG