Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1533 |
Symbol | |
ID | 4709182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1665630 |
End bp | 1666979 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639856000 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001003102 |
Protein GI | 121998315 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.104993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGCACG CGAACCACCT GCTGATCGTC GAGGATGACA AGGGGCTCCA GGAACAGCTG CGCTGGTGTT TCGACGGCTA TGAGATCGTT CCGGCCTTCG ACCGCGCGGA GGCTGTTGCT TTGGCGCGGC GTTACGAGCC CGAGCTCGTC CTGCTTGATC TCGGGCTCCC CCCGGATCCG GCCAATGCCA GCGAGGGGCT GGCGGCCCTG CAAGAGGTGC TCGCCGAGGC GCCCGAGAGC AAGGTGATCG TGGTCACCGG TAACGATGAC CGGGAGAATG CGCTCAAGGC CGTCGCGCTC GGCGCCTACG ACTTCTACGG GAAACCGGTG GATCCGGATA CCCTGCGACT GCTAGTGGAT CGAGCCGCAC AGCTTTATAG CCTCGAGGCG GAGAACCGTC GTCTGGCACA ACAATCGGCA TCGCCGCTGG AGGGGTTCCT TAGCTCGGAC CCGGGGGCGC TGCAGGTCTG CCGGATGGTC GAGCGCGTCG CCCCGGCGGA TGCTACGGTC CTGCTGCGCG GGGAGAGCGG TACCGGCAAG GAGATCCTCG CCCGTGCGGT TCATCGGCTC AGTGGCCGCC GTGAGCAGCG TTTCGTTGCC ATCAACTGCG CCGCGATCCC GGAGAATCTC CTCGAGAGTG AGCTCTTCGG GTATGAGAAG GGTGCTTTTA CCGGGGCCAA CCGCCAGACC ATTGGCAAGA TCGAATACGC CAGTGGCGGG ACGCTGTTCC TCGACGAGAT CGGCGACTTG CCCTTGAGTC TTCAGGCCAA GCTGCTTCGC TTTCTGCAAG AGCGGACCAT CGAGCGCCTC GGGGGCCGGC AATCGATCGA GGTGGACGTG CGGGTGGTTT GTGCCACCCA TCGCGATCTG GCGGAGATGA TTCGCGACGG CGGCTTCCGC GAGGATCTTT TCTACCGCGT TGCCGAGATC GAGCTGACCA TACCGCCGCT GCGCGAGCGT CCTGGTGACG CCGTTCTCGT GGCCCACGCC CTGCTCGATC GCTTCGCCCG CGAGCAGCGC CAGCCGCGTC GCCTGTTGAC CCCGGAGGCT ATCGACGCCA TCGAGGCCTA CCCGTGGCCC GGCAACGTGC GGGAGATGGA GAACGTCATC CGCCGGGCGG TGATTATGGC CGATGGCAAA AAGATTGCTG CGGAGGATCT CGCGCTGGAA GTACCGGAGG GTGGTGGCGA GGACCGGCTG CGCCTCAAGG ATGCCCGGGA GCAGGCCGAG TACCAGGCGG TCGTCCGTGC GCTAAGCCGC TCGAATGGGA ATATCGCGCA GGCCGCCGGT CTGCTGGGGA TTACTCGGCC GACCTTGTAC ACCCTCATGG ATAAATTCGC CCTGCGCTGA
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Protein sequence | MGHANHLLIV EDDKGLQEQL RWCFDGYEIV PAFDRAEAVA LARRYEPELV LLDLGLPPDP ANASEGLAAL QEVLAEAPES KVIVVTGNDD RENALKAVAL GAYDFYGKPV DPDTLRLLVD RAAQLYSLEA ENRRLAQQSA SPLEGFLSSD PGALQVCRMV ERVAPADATV LLRGESGTGK EILARAVHRL SGRREQRFVA INCAAIPENL LESELFGYEK GAFTGANRQT IGKIEYASGG TLFLDEIGDL PLSLQAKLLR FLQERTIERL GGRQSIEVDV RVVCATHRDL AEMIRDGGFR EDLFYRVAEI ELTIPPLRER PGDAVLVAHA LLDRFAREQR QPRRLLTPEA IDAIEAYPWP GNVREMENVI RRAVIMADGK KIAAEDLALE VPEGGGEDRL RLKDAREQAE YQAVVRALSR SNGNIAQAAG LLGITRPTLY TLMDKFALR
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