| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1507 |
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| Symbol | |
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| ID | 4709120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1629989 |
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| End bp | 1631521 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639855974 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_001003076 |
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| Protein GI | 121998289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.577803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTTAG AGCAACTCTA TCAGCACATT ATCCAGCAGC TGCGCGCCTC CTGGCGGCGC
CGGTGGTGGC TGATCCCGGT CGCGTGGGCG GTCTGCCTGG TCGGCTGGGC TTACATCAAC
ACCTTACCCG ATGTCTATCA GTCTTCAAGC CGCGTCTACG TAAACTCTCA GACCGTGCTC
GAACCCCTGT TACGCGGTAT GACCGTCCGT CCGGACACAG AGCAGCGCGT CCGCATGATG
ACTGTAACCC TTCTCAGCAA CGACAACCTC AGGGAGATCG CTCGCCAAGC GGATCTCGAT
GTCCTGCTCA ACCAGGATAA TGAACAAGCG TTGATCGGCA CCTTGCGCGG CGGCATTCAA
TTGGACGGTG GCCGGCGCGA TAACATCTAC ACCATCGCCT TTTCCCACCG GGATCCCGAG
GTCGCCTATC GGGTCGTCCG CGAGACCTCC AATCTGTTCA TGGAGCGCGG CCTTGGCGAC
TCGCGGGTTG ATCTCGCCTC CTCGCAGACG TTCATCGAGC GACAGCTCCA ACGTTACGCC
AGTCAGCTGC AGAACAAGGA GGCTGAGCTT GAATCCTTCA AGCGTGAGAA CCATTCGCTG
CTCAGCGCTG GCGGCAACTA TTACACCCGG CTGGAGCGCG CTCGCGACGC CCTTGAGCAG
GCACAGCTCG AGCGGGACGA ACACGCCCAA CGTTTAGAAA CTCTGCAGGC CAGGCTCGAA
AAAGACAGAC AATCCCCCAT TGCCGAGGAC GCGCATTTGA GTAACCCCCG GCTGGACCAA
CGGATCAGCC GGCTGGAATC CCAGCTCGAT GAGATGCGGC GCCACTTCAC GGATGCCCAC
CCGGACGTCG CCCAAACTCG ACGCATCCTC AAGGAGCTTG AGGAGCGGCG CCGTGAAGAA
ACCCGCATGG CTCTCGCAGA TCCCGCTCGG TCCGTCGAGG GCGTTGTCGG CAGCCCGCTC
CGGTTGGCAT TGGTTGACGC AGAAAGCCAT GCTGCTTCGC TGGAAACCCG CGTTCAAGAG
CATAAGCGGC GCGTGGAGAA CATCGCCGCG CTTGTCGATC AGGTTCCTGC CATCGAATCC
CGATTCAATG CCTTAAAGCG CGACCACGAG GTGCTGCAGC AAAGCTATCG CCAACTGCTG
ACCACCCGCG AGCGGGCCGC CATGACCGGG TCCGTCGAGA CCGAGACGGC TGCCGTCGAT
TTCCGGGTCC TGGAGCCGCC GACACGGCCG AGTTCGCCGT CCGCACCCGA TCGCCCCCTG
CTTGCGAGCG GTGTCCTCCT GCTAGGCCTC GGCGCCGGCT CCGGACTGGC CTACCTGCTC
GCTCAGTTGC GCGGCACCGT CACCTCCACC GCACGCCTGG CGGAGATCAC CCGTCGCCCC
GTACTGGGCT CGGTCACCCG GGTCCCGACC CCGAACCGGC GGCGGCGTCA ACGGCTCGAG
CTCATGATCT TTGCAGGGAT CCTCGGAACC CTCTTTGTGG CCTATCTGAT GGTGTTGGCG
TACTACGGCG GCGGGGGGTT GTGGCCGTTC TAG
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| Protein sequence | MGLEQLYQHI IQQLRASWRR RWWLIPVAWA VCLVGWAYIN TLPDVYQSSS RVYVNSQTVL
EPLLRGMTVR PDTEQRVRMM TVTLLSNDNL REIARQADLD VLLNQDNEQA LIGTLRGGIQ
LDGGRRDNIY TIAFSHRDPE VAYRVVRETS NLFMERGLGD SRVDLASSQT FIERQLQRYA
SQLQNKEAEL ESFKRENHSL LSAGGNYYTR LERARDALEQ AQLERDEHAQ RLETLQARLE
KDRQSPIAED AHLSNPRLDQ RISRLESQLD EMRRHFTDAH PDVAQTRRIL KELEERRREE
TRMALADPAR SVEGVVGSPL RLALVDAESH AASLETRVQE HKRRVENIAA LVDQVPAIES
RFNALKRDHE VLQQSYRQLL TTRERAAMTG SVETETAAVD FRVLEPPTRP SSPSAPDRPL
LASGVLLLGL GAGSGLAYLL AQLRGTVTST ARLAEITRRP VLGSVTRVPT PNRRRRQRLE
LMIFAGILGT LFVAYLMVLA YYGGGGLWPF
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