Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1469 |
Symbol | |
ID | 4710447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1585939 |
End bp | 1587138 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639855936 |
Product | aminotransferase, class I and II |
Protein accession | YP_001003038 |
Protein GI | 121998251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGCG GTCTCTCCGA GCTGCAGCCC TACCCCTTCG AGCGCATGGA GCGGCTCCTG ACCGGGCGCC GAGCGGGGCC TGCCGCCCCG ATCCGCCTAG GCATTGGTGA GCCCCAGGAC CCGCCTCCCG AGTTGCTCAC CCGGGTGCTC CGGGACAACC TGGATCAGGT GGCTCGCTAT CCGGCCACCC GGGGCCTGGA GTCACTGCGT GAGGCGATCG CCGGATGGCT GCGCCGCAGA TACCGCCTCC CCGAGGCGGC GATCAACCCG GATGAGCATG TGCTGCCGGT GGCGGGCACC CGCGAGGCGC TGTTCGCCAT CGCCCAGACC GTCATTGGCC GGGGGCGGCC CTATGTGGCG ATGCCCAACC CCTTCTATCA GATCTACGAG GGCGCGGCGC TGCTCAGCGG TGCCCGCCCG CTCTACCTGC CGATTGAGCC CGGCAGTGGC CTGCCCGATC TCGACGCCAT CGAGCCCAGG ACCTGGCAAC GGGTGCAACT GCTTTACCTC AACAGCCCGG CCAACCCGAC CGGCGCCGTA GCCGACTCCG ATTACTACCG GCGCGTTCTG GAGCTGTGCG ATCGCTACGG CTTCATCATC GCCGCCGACG AGTGTTATAG CGAGATCTAC GCCGATGAGG CCAATCCCCC GCCCGGTCTA TTACAAGTCT GCCAGGCCGA GGGGCGCGCG GATTTCCATC GGTGCCTGGT CTTCCACAGC CTCTCCAAGC GCTCCAACGC CCCTGGCCTG CGCTCCGGGT TCGTGGCCGG GGATCCCGGC CTGATTCACG CCTTTCTGCG CTACCGCACC TACCAGGGCT GCGCCCTGCC CCTGCACGTT CAGGCTGCCA GCGCCGCAGC CTGGAGGGAT GAAGCGCACG TCATCGAGAA TCGGGCACGC TATCGCGAGC GCTACGAGGA GGTGTGTACC ATCCTCGCCG AAGCACTCGA CGAGGTAGCC CCGCCGCCGG CGACCTTCTA CCTCTGGCCA CGTACGCCCA TCGACGACCA GACTTTCACC CGCCGGCTGT GGGAGGAGGA GAACGTCACG GTGTTGCCGG GCAGCTTCCT CTCCCGCCCC GGTGGCGACG GCACGCCCCC CGGCGCGGGA CGCATACGCA TGGCGCTGGT TCCGGATCTA GCCACCTGCA TCGAGGCGGC AGAGCGGATC CGGCGGTTTG TCCATCGAAA CTTCCAATAG
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Protein sequence | MNRGLSELQP YPFERMERLL TGRRAGPAAP IRLGIGEPQD PPPELLTRVL RDNLDQVARY PATRGLESLR EAIAGWLRRR YRLPEAAINP DEHVLPVAGT REALFAIAQT VIGRGRPYVA MPNPFYQIYE GAALLSGARP LYLPIEPGSG LPDLDAIEPR TWQRVQLLYL NSPANPTGAV ADSDYYRRVL ELCDRYGFII AADECYSEIY ADEANPPPGL LQVCQAEGRA DFHRCLVFHS LSKRSNAPGL RSGFVAGDPG LIHAFLRYRT YQGCALPLHV QAASAAAWRD EAHVIENRAR YRERYEEVCT ILAEALDEVA PPPATFYLWP RTPIDDQTFT RRLWEEENVT VLPGSFLSRP GGDGTPPGAG RIRMALVPDL ATCIEAAERI RRFVHRNFQ
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