Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1459 |
Symbol | |
ID | 4710999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1575035 |
End bp | 1576402 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855926 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001003028 |
Protein GI | 121998241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATCG TCTGGAGCGT CATCGCCTTC CTGGTCGCCA TCGCCATCTT GGTGACCGTT CACGAGGCGG GCCATTTCTT CGTGGCCCGC TGGTGTAACG TACGGGTGCG CCGCTTCTCG GTGGGGTTTG GTCGGCCGTT GCTCAGTTGG CGTGGGCGCG GCCCCGATCA CATCGAGTAC TGCCTATCGG CCATCCCGCT CGGTGGCTAC GTGCAGATGC TCGACGAGCG CGAGGGCGAA GTAGACCCCG CCGAGCGCCA CCGGGCCTTC AACAATCGCC CCCTGGGACA GCGCACGGCC ATCGTGGTCG CGGGGCCGGC AGCCAACTTC CTCTTTGCGG TGGTTGCCTA CTGGCTGGTG GCAGTGCTCG GGATTGTCGA GCTGCGGCCG ATTGTCGATG AGCCGATCGC GGATACCCCC GCCGAGATGG CCGGGTTCGA GCGCGGCGAG GAGATCGTCG CTATCGACAG CCGCGATACC CCCACCTGGC AACGGGTCGC CATGGGGCTA ATGAACGCCG GGTTCCATCG GGAGGATGTC CCGGTCACCG TGCGCGACGA GGCGGGCAAT GAATTCTCGC GCACCCTGGA TCTCCGCTCC GAACCGAAGC TGAAAGACAC CACCGATATC CTCGGGGTCA TCGGCCTGCG TGCCTACACG CCCGATCTGC CCGCCACCGT CGGTCGCCTG GCTGAGGACG GTGCCGCTGG TCAGGCGGGG TTGCGTGAAG GCGACCGCAT CCGCGCCATC GACGGCGATC CGATCGACTC GTGGCTGGAA CTGGTCGAAC GCGTCGAGCC GCGCGCCAAC GAGGAGGTAA CCCTGACCTA CGAGCGGGAT GGCGAGGTCC GCGAGATGAC GCTCACCCTG GGGGCGCAGC AGCGGGGCGA TGCCGAGGTC GGCATGCTCG GTGTCGGGCC GGCCATCCCC GAGGGGTATC AGGAGCGCAT GGAGCGCGAG GTCCGTTACG GGCCGCTGGG TGGCGTGGTC TACGGGGCCG AGCGCACCTG GGATACCACC GTGGTGACGG TCAAGGTGCT CGCGCGGATG GTGATGGGCG AGGCATCGCT GAAGAACATC GGCGGCCCGG TGACCATCGG CCAGTTCGCT GGGGATACCG CCTCCATGGG TGTGGTACCG TTCCTCACCT TCCTGGCGGT GATCAGCATC AGTCTGGGCA TCATCAACCT GTTGCCGATC CCGATCCTCG ACGGTGGTCA TCTGCTCTAC TTCCTCACCG AGGCGATCCG CGGCAAGCCG GTATCCGAGC GGACCCAACT GATCGGGCAG CAGGTGGGGA TCGTGATCCT GCTCGGACTG ATGGCGCTGG CCTTTTACAA CGATTTTGAG CGCTTGCTTG GCGGGTAA
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Protein sequence | MMIVWSVIAF LVAIAILVTV HEAGHFFVAR WCNVRVRRFS VGFGRPLLSW RGRGPDHIEY CLSAIPLGGY VQMLDEREGE VDPAERHRAF NNRPLGQRTA IVVAGPAANF LFAVVAYWLV AVLGIVELRP IVDEPIADTP AEMAGFERGE EIVAIDSRDT PTWQRVAMGL MNAGFHREDV PVTVRDEAGN EFSRTLDLRS EPKLKDTTDI LGVIGLRAYT PDLPATVGRL AEDGAAGQAG LREGDRIRAI DGDPIDSWLE LVERVEPRAN EEVTLTYERD GEVREMTLTL GAQQRGDAEV GMLGVGPAIP EGYQERMERE VRYGPLGGVV YGAERTWDTT VVTVKVLARM VMGEASLKNI GGPVTIGQFA GDTASMGVVP FLTFLAVISI SLGIINLLPI PILDGGHLLY FLTEAIRGKP VSERTQLIGQ QVGIVILLGL MALAFYNDFE RLLGG
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