Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1392 |
Symbol | |
ID | 4711162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1503047 |
End bp | 1504324 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639855859 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001002961 |
Protein GI | 121998174 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGACC CCAAACTGCT GCGTAACGAT CCCGAAGGCG TCGCCGCCAA CCTGGCGCGG CGCGGATTCG AATTCGATGC GGCCGGCTAC CGGGCGTTGG ATGCTCGGCG GCGTGACCTT CAGCAGGAGA CGCAGACCCT GCAGAACCAG CGCAACGAGC GCTCCAAGGA GATCGGAGCG GCCAAGAAGC GCGGTGAGGA CATCGAGCCG CTGAAGGCGG AGGTGGGTCG CATCGCCGAG CGGCTGAGCG AGGCCGAAAC GGCCCTGAAC GAAGTGCAGG AGCAGCTCGA TGAGCTGCAT CTGGGCCTGC CCAATCTGCT CGATGAGCAG GTCCCCGATG GTCAGGACGA GGAAGACAAC CGCGTACTTC GCCAGTGGGG CGGGATCCCG GCACTGTCCT TCAAGCCGCG GGATCACGTC GACCTCGGCG AGCTGCTGGG CGGGATGGAT TTTGAGGCCG CCGCGCGTAT TGCCGGGAGC CGCTTCGTCA CCCTCAGCGG CCCGCTGGCG CGTCTGCACC GCGCCCTGAC CCAGTTCATG CTCGACCTGC ACTGCCGGGA GCACGGCTAC ACCGAGGTCT ATGTCCCGTA TCTGGTCAAT GCCCGCTCCC TGACCGGTAC CGGGCAGCTA CCCAAGTTCG AGGACGACCT GTTTCGCGTC GAGCACGATC CGAGCCTTTA TCTCGCCCCG ACGGCCGAGG TGCCGGTGAC CAACCTGGTC CAGGAGCGGA TCGTCGAGGA CGCCGACATG CCGTTGCGTT TCGTCTGCCA TACGCCGTGC TTTCGCTCCG AGGCCGGCAG CTACGGCAAG GACACGCGCG GCATGATCCG TCAGCACCAG TTCGAGAAGG TCGAGCTGGT GCAGGTCGTG CGCCCCGGCG AGTCCTGGGA TGCCCTGGAG GCTCTCACCG GCCACGCCGA GACCGTACTG CGCCGCTTGG CGCTGCCCTA CCGGGTGGTC TCGCTGTGTG GCGGGGACAT CGGCTTCTCG GCGGCGCGCA CCTACGACCT GGAGGTGTGG CTGCCCGCCC AGGAGCGCTA CCGCGAGATC TCCTCCTGCT CGAACTTCAC CGACTTCCAG GCCCGCCGAC TGCAGGCGCG CTGGCGCAAT CCGGAGACCG GCAAGCCGGA GCCCGTGCAC ACCCTCAACG GCTCCGGACT GGCGGTGGGC CGCTGCCTGG TGGCGATCCT GGAGAACTAT CAGGAGGCCG ACGGCCGGGT GAACGTCCCC GAGGCCCTGG TCCCGTACAT GGGTGGGCAA CGGCTCCTGG GGGACTGA
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Protein sequence | MIDPKLLRND PEGVAANLAR RGFEFDAAGY RALDARRRDL QQETQTLQNQ RNERSKEIGA AKKRGEDIEP LKAEVGRIAE RLSEAETALN EVQEQLDELH LGLPNLLDEQ VPDGQDEEDN RVLRQWGGIP ALSFKPRDHV DLGELLGGMD FEAAARIAGS RFVTLSGPLA RLHRALTQFM LDLHCREHGY TEVYVPYLVN ARSLTGTGQL PKFEDDLFRV EHDPSLYLAP TAEVPVTNLV QERIVEDADM PLRFVCHTPC FRSEAGSYGK DTRGMIRQHQ FEKVELVQVV RPGESWDALE ALTGHAETVL RRLALPYRVV SLCGGDIGFS AARTYDLEVW LPAQERYREI SSCSNFTDFQ ARRLQARWRN PETGKPEPVH TLNGSGLAVG RCLVAILENY QEADGRVNVP EALVPYMGGQ RLLGD
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