Gene Hhal_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1352 
Symbol 
ID4710908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1460979 
End bp1461767 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID639855819 
ProductABC transporter related 
Protein accessionYP_001002921 
Protein GI121998134 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCGTC CGGCCATCGA ACTACGAGGT GTTCGCTACG CCTATCGGCG CAGCGAGGTC 
TTGCAGGGCG TGGATACCCG CGTAGCCGCC GGCGAGGTGG TGGCCCTGAT CGGGCCCAAC
GGCTCCGGCA AGAGCACCCT GCTCAAGTGC ATCACCGGCA TCCTGCGGCC GCGCCACGGG
CACATCACCA TCGCCGGTGA GCCCGTGAAG GGGCAGCGCC AGGCCCGCAT CGCCCGCTCG
CTCTCCTACG TCGCGCAGAC CACCGATGCC GTCTACCCGC TGACCGTACT TGAGAGCGTG
TTGCTTGGCC TGCGCCGGGC GAGTTGGCGT CACGACCCGG CCGATCTTGC CCGTGCCGAG
GCGGTGCTCC AGCGTCTGGG CATGGCCGAC CTGGCCCAGT CACCGCTGAC CGAGATCAGC
GGCGGGCAGC GGCAGAAGGC GGCCATCGCC CGGGCTCTGG TTCGCCAGAC CCCCTTCCTG
CTCCTCGATG AGCCGACCAA CCACCTGGAC ATGAAGCACA AGCGCGACGC CATCGAGATC
CTCACCGAGT GTGCGCGGGA GCAGGGGCAG GGGGTGCTGG TGGTGCTCCA CGATATCAAC
ATCGCCGTAC AGCTGGCCGA CCGCATCGTG CTCCTGCGCG ACGGCCGGGT GATGGCCGAC
GGCCCGCCGC AGGCCGTCAT CGACACGCCG ACTCTGCGTG CCGCCTACGA CGTGGACGTT
CACGTCGTCG AGCATCAGCG GGCACCGTTT GTGGCCGGTT ACCAGTTGCA AGAGAGGGGA
CGCGGATGA
 
Protein sequence
MTRPAIELRG VRYAYRRSEV LQGVDTRVAA GEVVALIGPN GSGKSTLLKC ITGILRPRHG 
HITIAGEPVK GQRQARIARS LSYVAQTTDA VYPLTVLESV LLGLRRASWR HDPADLARAE
AVLQRLGMAD LAQSPLTEIS GGQRQKAAIA RALVRQTPFL LLDEPTNHLD MKHKRDAIEI
LTECAREQGQ GVLVVLHDIN IAVQLADRIV LLRDGRVMAD GPPQAVIDTP TLRAAYDVDV
HVVEHQRAPF VAGYQLQERG RG