Gene Hhal_1328 details

Gene Information

• Locus tag: Hhal_1328
• ID: 4710880
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1436320
• End bp: 1438338
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639855795
• Product: histidine kinase
• Protein accession: YP_001002897
• Protein GI: 121998110
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0784] FOG: CheY-like receiver; [COG2205] Osmosensitive K+ channel histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATTTTG AACTGCTTCG GCGGGGAACG CAGGGATCAT CCACACAGGG CCTCCAGCTG 
CTTCAGGCAA CCCTGGATGC TCTGGATGCC CATATTGTGG TCATCGACCT ACAGGCCCGC 
ATCCGCCTGA CCAATCGGGC CTGGCGCCGC TTCGCCCAGG ACGGGCAAGC AACGCAGGAA 
CAGGTGGGCA TCGGTGCCGA CTACATGGCC GCGCTGCGCA ATGCCCGCGA AGCTGGCGAC 
GCCGATGCGG CGGTGGTCCT GGAACGCATC GAGGATCTGC TCGCCGGTCG CCGGCCTTTT 
GCCCACCACG AGTACCCCTG CCCCGGGCCG GACCGCGAGC GATGGTTCGT TATGCAGGCC 
ACCCCGCTAC GGTTCGACGA AGACAGCACG CCGGAGGGGG CCGTCATCGC CCATAGCGAT 
ATCACCGATC GTTTCCGGGC GGAGCAGACC GCCGGCGAAA TGGCGCGGCA ATTGCGCGAG 
CGCGTCAAGG AGGCAGAGTG CCTAGGCGGC GTCGCCATGC TGACCCACCG TGCCACCAGT 
ATCCCGGATA CCCTGACGGC CATCGCCGAG CACCTGCCCA CTGGCTTTCT GCACGAACAC 
GCCTGCCGCG CCGCCATCAC CTACCGGGAC AGGCGCTATC CACCCGACGA GCCGACGCCG 
GAAATGGGGG CGCGCCTTAG CGCCCCGATC CACATCAGGG GCGAAGGGGT CGGTCAGATC 
ACGGTGGGCT ACGATGCGCA GCTTGGGCTG GGCGATGACC CCTTCCTGCC CGAAGAACAG 
CGGCTGATCG AACGCAGCGC CCTGCTTCTG GGCCAATACT TGCATCGAGA AGAGATCCGC 
AAAGAGCTCG AGGGCGCCAA CCGGATCAAG ACCCAGTTCC TCAATGCCGT CAGTCACGAT 
CTGCGCACCC CGCTCAATGC CCTGCTCGGC GCGATCGACA TGCTCTCGGA GACACCGCTG 
AGCGAGGAGC AGCGAGCGCA TTTGTCGTTG GGCGCGCGCG CCGGCGAGAA GCTGGAAGGC 
CTGATCGATA TGCTTCTCGA TCTGGCGCGA TTGCAGCACG GCCGGCTGAA CCTCAAACAC 
GAACCCTTCG ACCTGCTGGA TGTCGTCCGC CGCCAGGTCG AGTTGGTCGA ATCCGCGCGG 
GCAAAACCGG CGGTCACGAT CGAGATCGCC ACCGAGGGCG CAGAACCCTG GCTGGTCGAG 
GGCGACGGCG AGCGAGTTGG CCAAGTAATC AGCAATCTGG TGGATAACGC GGTCAAATTT 
ACTGCTTCGG GCAACGTAAC GGTCCGCTTG GCCCGTGTCG GCGAGGAGTG GATCCGGATA 
CGGGTCCTGG ACACCGGCCC GGGGATCGGT GAAGCCGAGC GCGAGCGCAT CTTCGACTGG 
TTCTTTCAGG GCGAACGGGT CACCGAGGAG CACGGCGGGA TCGGCCTCGG CCTGCGCATT 
TGCCTGGAGC TCCTTCGCGC CATGGGGGGC TCCATCGACG TCGCGAATCG CCGCGACGGA 
CCCGGCGCCC AATTCACCCT GCTGCTACCG TTGCCAGCTT CGGCAGCCAA CTTGTCGACC 
CCAGCTACGC GAAGCCAGCA AGGCAGCATG GCTGCACAGC AGACGGAAAA ACCGCTTAAT 
GGCGTCCGCG TGGTGGTCGC CGACGATGAA CCGATCAATG CCCGCCTCAC CCAGGCGTTG 
CTCGAGCAGA TGGGTGCGCA TGTCTTCCTC GTGGATGACG GCCCGGGGGC GCTGGCAGCC 
TGGCGGGATC GGGGCCCGGA CCACCTGCTC CTCGACGTCC AGATGCCTGG TCTGGAAGGT 
CCAGAGGTCG TGCGGCGCAT CCGCTGTGAA GAGGCCGAAA CCGGCCGGCG GCGGACGCCG 
ATCACCATGC TGACGGCCCA AGACGCACCC CCCGTGCGTA CGGCCTGCGA GCAGGCCGGC 
GCCGACGGCT ATCTGCTCAA GCCGGTCCGC GCTGCGGATC TGCGCAGTCA CGTGGCCCGT 
AGCGATCCTC CGGGCGCTCA GGGAGTTACC CCGACTTGA 

 

Protein sequence

MHFELLRRGT QGSSTQGLQL LQATLDALDA HIVVIDLQAR IRLTNRAWRR FAQDGQATQE 
QVGIGADYMA ALRNAREAGD ADAAVVLERI EDLLAGRRPF AHHEYPCPGP DRERWFVMQA 
TPLRFDEDST PEGAVIAHSD ITDRFRAEQT AGEMARQLRE RVKEAECLGG VAMLTHRATS 
IPDTLTAIAE HLPTGFLHEH ACRAAITYRD RRYPPDEPTP EMGARLSAPI HIRGEGVGQI 
TVGYDAQLGL GDDPFLPEEQ RLIERSALLL GQYLHREEIR KELEGANRIK TQFLNAVSHD 
LRTPLNALLG AIDMLSETPL SEEQRAHLSL GARAGEKLEG LIDMLLDLAR LQHGRLNLKH 
EPFDLLDVVR RQVELVESAR AKPAVTIEIA TEGAEPWLVE GDGERVGQVI SNLVDNAVKF 
TASGNVTVRL ARVGEEWIRI RVLDTGPGIG EAERERIFDW FFQGERVTEE HGGIGLGLRI 
CLELLRAMGG SIDVANRRDG PGAQFTLLLP LPASAANLST PATRSQQGSM AAQQTEKPLN 
GVRVVVADDE PINARLTQAL LEQMGAHVFL VDDGPGALAA WRDRGPDHLL LDVQMPGLEG 
PEVVRRIRCE EAETGRRRTP ITMLTAQDAP PVRTACEQAG ADGYLLKPVR AADLRSHVAR 
SDPPGAQGVT PT