| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1311 |
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| Symbol | |
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| ID | 4710819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1421753 |
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| End bp | 1422976 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855778 |
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| Product | helix-hairpin-helix DNA-binding, class 1 |
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| Protein accession | YP_001002880 |
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| Protein GI | 121998093 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0682087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGT TCAATCTCGG CAAGAAGGAC GCCTACGGCA AGCAGCGGCG CGTTGAGCAC
CGCGGCAAGT ACCTGCGGGC CAGTCGCACC GGCGGCGTGG CGCTGCGCGC CCAGGCCCGG
GCGGCGGGTG TGAACCTCAC CGCCAACACC CGGCGCGGTG TCCGGGCTTC GATGACGCCG
GCGAAGAACA CCCAGGTGGC CTTGCAGAAC GGCCGTTTCA TCCTGCGCGG ACGCTACGGG
AACGGGCCGA CCAAGCTGAA CCTCTCCAAA AGCGGTGCGA CGGTCTCCAC GCGCAACCGG
CTCGGCTCGT TCAACTGGCT CAAGCCCAAC CGCTCCTCGG CGAAGCTCTT CGGCGTCCAG
GTCCGGGGGC AGAAGGCGGC CCAGCTTCAG GTCTTCTATA TGCTCTTCGC CGCCGTTGTC
GGTGGCGTGC AGCTGCTCCT GATGCTCATT GGCGGGCTGC TGCGCGGCGC CGTTGCCCTC
GGGCAGTGGG TGGGTGACCA CGTGCACGCC CTGCCGCGGC GTTGGCGCAA TGCCCGGTTG
CGCCGCCAGC GCGGGCGGAT CGACGAGGCC GTTGAGCAGG CGATCAACCG CTGGGACGCG
GACCGGCTCA GTGCTGCAGT CGCCCTGGCG GTTGCCCTAT GGGGGCGCGG TGAAACGCTC
AAAGCGGGGT GGCACCGCGT CCAGCAACGT GTCACCCAGA ATCCGGGCTT TGAAGCCCTG
CCCCGATCAC CGGAGGTGTT CGAAGAGGTC GCTGCCGAGC TCGAGCGCTG CCGGGCCGCG
GTGAAGCTGA CACAGGATGC GCATCGGATC GTGCTCGCGT TGCTGGCGGA GGCCGCTACG
CAAGGGATGG ACGGGGGGCG GCGGGCAGAG CTGCTGTTCG ATGCGGACGA TCTGGCCCTG
GCCCGGGGTC CGCGGACCGT GCTGCAGGAA GAGCTGCTCG AGATCTTCGC CGACCATGCG
CAACTCTGTC TGGAGCCGGC CTTGCCGGTG GACACGACAC AACGGCAGTG CGGCCGATCC
CGCCCAGGGC GTGACCTGTC GCAGGGACTG ATCGACCTCA ACACCGCCTC CATCGAAGAG
CTTCAGGTGA TCCCGCACAT CGGCCCGGAG CGCGCCGAGG CGATCGTCGC CATGCGACCG
ATTCGGCGGA TCGAGCAGCT TGAAGAGGTC GACGGCATCG GACCGAGCCG GCTCGCGGAG
ATTGCCGAAC AAACCCGGGT ATGA
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| Protein sequence | MGLFNLGKKD AYGKQRRVEH RGKYLRASRT GGVALRAQAR AAGVNLTANT RRGVRASMTP
AKNTQVALQN GRFILRGRYG NGPTKLNLSK SGATVSTRNR LGSFNWLKPN RSSAKLFGVQ
VRGQKAAQLQ VFYMLFAAVV GGVQLLLMLI GGLLRGAVAL GQWVGDHVHA LPRRWRNARL
RRQRGRIDEA VEQAINRWDA DRLSAAVALA VALWGRGETL KAGWHRVQQR VTQNPGFEAL
PRSPEVFEEV AAELERCRAA VKLTQDAHRI VLALLAEAAT QGMDGGRRAE LLFDADDLAL
ARGPRTVLQE ELLEIFADHA QLCLEPALPV DTTQRQCGRS RPGRDLSQGL IDLNTASIEE
LQVIPHIGPE RAEAIVAMRP IRRIEQLEEV DGIGPSRLAE IAEQTRV
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