Gene Hhal_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1305 
Symbol 
ID4710797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1417061 
End bp1417714 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID639855774 
Producthypothetical protein 
Protein accessionYP_001002876 
Protein GI121998089 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGTGGCC GGTTCGCCCG TTACGCTCCG CATTCCCGAA TCATGCGAGC GCTTCGCATC 
GATTACGACG ACTGCGGCGA ACTCTCACCT GACTACAACG TACCGCCGGG CACGCAGCAG 
CCGGTCGCCG TGTCTTGCGA TCACGGCAGG CATCTCTTGC CGTTGCTTTG GGGATTTCGG 
CCATGGTGGG CCGACGCCAG CCAACCCGCA CCGATCAACG CCCGGGCGGA GACGGTCGCC 
TCCAGCCCTT ACTTCCGCTC TGCATTCGCC CATCGCCGCT GCCTGATTCC AGCCAGCGGT 
TGGTTCGAGT GGCAAAAGGC CGAACAGGGG AAGGTTCCGC ACTTCATCGC CTCCCGGGAC 
GACGACCTGC TGTGCTTCGC GGGTGTCTAT GAGCCGGCCA CCGAAGAACG GGCGGCGTCC 
TTCGCAATCA TCACGCAGCC GTCGAAGGCG CATCTGCAGC CTCTCCACGA CCGCATGCCG 
CTCGTCCTCG CGCCCGAGTG CTGGGACGAG TGGCTGGATC CCGAAATCAG TGATCGGAAG 
TCCGTGAAAG CGGCAACTCG CGGCCTAAAT ATGGCGCAGC TGGTCGCACA TCCGGTCAGC 
TCTCGGGTGA ACACACCCAA GAACAACGGT CCTGACTTGA TTCGCTCCCT CTAA
 
Protein sequence
MCGRFARYAP HSRIMRALRI DYDDCGELSP DYNVPPGTQQ PVAVSCDHGR HLLPLLWGFR 
PWWADASQPA PINARAETVA SSPYFRSAFA HRRCLIPASG WFEWQKAEQG KVPHFIASRD 
DDLLCFAGVY EPATEERAAS FAIITQPSKA HLQPLHDRMP LVLAPECWDE WLDPEISDRK 
SVKAATRGLN MAQLVAHPVS SRVNTPKNNG PDLIRSL