Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1292 |
Symbol | |
ID | 4710770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1403501 |
End bp | 1404007 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639855763 |
Product | IS3 ORF2 |
Protein accession | YP_001002865 |
Protein GI | 121998078 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.276871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGTACG CGTTCATCGA TCAGCAGCGT CACGAGCACC GGATCCAGGC GATGTGCCGC GTCCTTGGCG TCGCTCGCAG CGGCTTCTAC GCATGGTGCC GGAACAAGGC GGCCCGCGCC GCACGGGAAG AACGCCAGCA GGCCTTTGAT GGGCAGGTGC AAGAGGCCTT CGAAGACTCC AGGCAACGCT CTGGAGCGCC TCGACTGACG CGAGAGCTGG ACGGGCAAGG CGTGTCGGCC AATCGCAAAA CCGTGGCCCG GAGCATGCGC CGTCAGGGCC TCCGGGCACG CACGTCACGC CGGTTTAAGG TGACGACGAA CTCGGCTCAC AGCCTGCCGG TCGCGCCAAA CCACTTGGCC CAGCACTTTG AAGCCGAGCA GCGGAACCAG AAATGGACTG GCGACATCAC GTATTTGGCG ACCGGCGAAG GATGGCTCTA TCTCGCGGTC GTCCTGGATC TTTGTGGCCG CAAAGTGATC GGTTGGGCCA TATGCGCGAG CAGATGA
|
Protein sequence | MKYAFIDQQR HEHRIQAMCR VLGVARSGFY AWCRNKAARA AREERQQAFD GQVQEAFEDS RQRSGAPRLT RELDGQGVSA NRKTVARSMR RQGLRARTSR RFKVTTNSAH SLPVAPNHLA QHFEAEQRNQ KWTGDITYLA TGEGWLYLAV VLDLCGRKVI GWAICASR
|
| |