Gene Hhal_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1286 
Symbol 
ID4709398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1398776 
End bp1399327 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID639855758 
ProductISXoo15 transposase 
Protein accessionYP_001002860 
Protein GI121998073 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.321435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCAAGA CCAGATGGCT GTATCGCTAC GTCCTGGACC GGCTGTGCTA CTGGCAGTGG 
TCTCCCGAGC AGATCGCCGG CAGACTGGCG CGTATGAACC CCGAGGATCC TGAGGCTCGC 
GTCAGCCACG AGACCATCTA CGCGGCGATC TATGCCCATC CCAAGGGCTC GCTCAAGCAG 
GAGCTGATCC GGGCGCTTCG CCGCCAGAAA CCGCAGCGCG GGCAACGGCG GCGCACGGCC 
GCGCGAGGCG GCTCGATCGC CCCGGAGCAC CTGCGCATCG CCTATCGGCC TGAAGAGATC 
GAGCAGCGGC TGATGCCCGG CCACTGGGAG GGCGACCTGA TCAAGGGCGC CTACAACCGC 
TCCTCGGTCG GCACGCTGGT TGAGCGCAAG ACCCGCTACG TCGTACTGAG CAAGATGCAC 
GACGGTACCG CCGAGGCCGC CCTGGAGGGC TTCCATCGGC AGATGAGGCG CCTGCCGGCA 
ATCCTGCGTC AGAGTCTGAC TACGACCGGG GCAGCGAGAT GGCCTGCCAT GAGCGGCTTG 
CCCGGCGGTT GA
 
Protein sequence
MGKTRWLYRY VLDRLCYWQW SPEQIAGRLA RMNPEDPEAR VSHETIYAAI YAHPKGSLKQ 
ELIRALRRQK PQRGQRRRTA ARGGSIAPEH LRIAYRPEEI EQRLMPGHWE GDLIKGAYNR 
SSVGTLVERK TRYVVLSKMH DGTAEAALEG FHRQMRRLPA ILRQSLTTTG AARWPAMSGL 
PGG