Gene Hhal_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1276 
Symbol 
ID4709403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1389273 
End bp1390304 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID639855750 
Productintegrase catalytic subunit 
Protein accessionYP_001002852 
Protein GI121998065 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACG GATACCAGCA TCTCAGTGAT CAGGAGCGCG CCGTCATCTT GAGTGAGCGC 
AGCCGTGGCA GCAGTGCGCG GGCGATCAGC CACCTTCTCG GGCGCAGTCC GTCGACGGTG
ACCCGGGAGT TGGCCCGCGG CAGCGACCCC GCGGCAGAGA CGGCGTACTG CCCGACGCAG
GGCGCGCAGG AGTACCGCGC CCGACGGCGC CGCTGCGGTC GCCCCGCCAA GCTGGTTGAG
GGCGGATGGC TGTATCGCTA TGTCCTGGAC CGGCTGTGCT ACTGGCAGTG GTCTCCCGAG
CAGATCGCCG GCAGACTGGC GCGTATGAAC CCCGAGGATC CTGAGGCTCG CGTCAGCCAC
GAGACCATCT ACGCGGCGAT CTATGCCCAT CCCAAGGGCT CGCTCAAGCA GGAGCTGATC
CGGGCGCTTC GCCGCCAGAA ACCGCAGCGC GGGCAACGGC GGCGCACGGC CGCGCGAGGC
GGCTCGATCG CCCCGGAGCA CCTGCCCATC GCCTATCGGC CTGAAGAGAT CGAGCAGCGG
CTGATGCCCG GCCACTGGGA GGGCGACCTG ATCAAGGGCG CCTACAACCG CTCCTCGGTC
GGCACGCTGG TTGAGCGCAA GACCCGCTAC GTCGTACTGA GCAAGATGCA CGACGGTACC
GCCGAGGCCG CCCTGGAGGG CTTCCATCGG CAGATGAGGC GCCTGCCGGC AATCCTGCGT
CAGAGTCTGA CCTACGACCG GGGCAGCGAG ATGGCCTGCC ATGAGCGGCT TGCCCGGCGG
TTGAATCTGT CGATCTGGTT CGCCGATCCG CACGCGCCCT GGCAGCGTGG CAGCAACGAG
AACACCAACG GCCTGCTGCG CCAGTACCTG CCCAAGGGCG CCGATCTCAG CGAGCCGAGC
CAGACCCAAC TCAATGATAT TGCGCGGCTT CTCAACCAGC GGCCACGCAA GGCACTGGAC
TTCAGAACGC CCGAGGAGGC CATGACTGAA GAGCTTCAGG CCTTTTCGAA GACTGTTGCG
CTTGATTCTT GA
 
Protein sequence
MANGYQHLSD QERAVILSER SRGSSARAIS HLLGRSPSTV TRELARGSDP AAETAYCPTQ 
GAQEYRARRR RCGRPAKLVE GGWLYRYVLD RLCYWQWSPE QIAGRLARMN PEDPEARVSH
ETIYAAIYAH PKGSLKQELI RALRRQKPQR GQRRRTAARG GSIAPEHLPI AYRPEEIEQR
LMPGHWEGDL IKGAYNRSSV GTLVERKTRY VVLSKMHDGT AEAALEGFHR QMRRLPAILR
QSLTYDRGSE MACHERLARR LNLSIWFADP HAPWQRGSNE NTNGLLRQYL PKGADLSEPS
QTQLNDIARL LNQRPRKALD FRTPEEAMTE ELQAFSKTVA LDS