Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1276 |
Symbol | |
ID | 4709403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1389273 |
End bp | 1390304 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855750 |
Product | integrase catalytic subunit |
Protein accession | YP_001002852 |
Protein GI | 121998065 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACG GATACCAGCA TCTCAGTGAT CAGGAGCGCG CCGTCATCTT GAGTGAGCGC AGCCGTGGCA GCAGTGCGCG GGCGATCAGC CACCTTCTCG GGCGCAGTCC GTCGACGGTG ACCCGGGAGT TGGCCCGCGG CAGCGACCCC GCGGCAGAGA CGGCGTACTG CCCGACGCAG GGCGCGCAGG AGTACCGCGC CCGACGGCGC CGCTGCGGTC GCCCCGCCAA GCTGGTTGAG GGCGGATGGC TGTATCGCTA TGTCCTGGAC CGGCTGTGCT ACTGGCAGTG GTCTCCCGAG CAGATCGCCG GCAGACTGGC GCGTATGAAC CCCGAGGATC CTGAGGCTCG CGTCAGCCAC GAGACCATCT ACGCGGCGAT CTATGCCCAT CCCAAGGGCT CGCTCAAGCA GGAGCTGATC CGGGCGCTTC GCCGCCAGAA ACCGCAGCGC GGGCAACGGC GGCGCACGGC CGCGCGAGGC GGCTCGATCG CCCCGGAGCA CCTGCCCATC GCCTATCGGC CTGAAGAGAT CGAGCAGCGG CTGATGCCCG GCCACTGGGA GGGCGACCTG ATCAAGGGCG CCTACAACCG CTCCTCGGTC GGCACGCTGG TTGAGCGCAA GACCCGCTAC GTCGTACTGA GCAAGATGCA CGACGGTACC GCCGAGGCCG CCCTGGAGGG CTTCCATCGG CAGATGAGGC GCCTGCCGGC AATCCTGCGT CAGAGTCTGA CCTACGACCG GGGCAGCGAG ATGGCCTGCC ATGAGCGGCT TGCCCGGCGG TTGAATCTGT CGATCTGGTT CGCCGATCCG CACGCGCCCT GGCAGCGTGG CAGCAACGAG AACACCAACG GCCTGCTGCG CCAGTACCTG CCCAAGGGCG CCGATCTCAG CGAGCCGAGC CAGACCCAAC TCAATGATAT TGCGCGGCTT CTCAACCAGC GGCCACGCAA GGCACTGGAC TTCAGAACGC CCGAGGAGGC CATGACTGAA GAGCTTCAGG CCTTTTCGAA GACTGTTGCG CTTGATTCTT GA
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Protein sequence | MANGYQHLSD QERAVILSER SRGSSARAIS HLLGRSPSTV TRELARGSDP AAETAYCPTQ GAQEYRARRR RCGRPAKLVE GGWLYRYVLD RLCYWQWSPE QIAGRLARMN PEDPEARVSH ETIYAAIYAH PKGSLKQELI RALRRQKPQR GQRRRTAARG GSIAPEHLPI AYRPEEIEQR LMPGHWEGDL IKGAYNRSSV GTLVERKTRY VVLSKMHDGT AEAALEGFHR QMRRLPAILR QSLTYDRGSE MACHERLARR LNLSIWFADP HAPWQRGSNE NTNGLLRQYL PKGADLSEPS QTQLNDIARL LNQRPRKALD FRTPEEAMTE ELQAFSKTVA LDS
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