| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1271 |
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| Symbol | |
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| ID | 4710740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1381997 |
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| End bp | 1385491 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855744 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_001002848 |
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| Protein GI | 121998061 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGCCG AGCCATCCAT CGAACCTGGT TTCCTGACCA TCCACGGCAA TCGGCTGGAA
GACCTTCGGC AGGTGGCCGT GGAGTGGGTG CAGCGGCACC CACTCGCACC CCTTGAGGAC
GAGGTGTTCC TGGTCCAGAG CAATGGTATG GCGCAGTGGC TGCGCCTGGC CTTGGCTCGC
CACCCGGATT CGGAGCAGGG CGGTTGCGGG ATCGCTGCGG CGGTCTCGAT GCAGTTGCCG
GCGCGCTTTC TCTGGTCGGT CTACCGTGCG GTCCTAGGCC CGGAGGGCGC CCCGCGGGAA
TCCCCCTTCG GCAAGGACCC GCTGCTCTGG CGGCTCGCGC GCCTGCTTCC CGCACTCCGC
GATCACCCTG GGTTTGAGCC GCTGCGCGGC TTCCTGGCCG ATGATCCCGA TGGGCGCAAG
CGTTATCAGC TCGCTGCACG GATTGCGGAT CTCTTTGATC AGTACCAGGT CTACCGTGCG
GACTGGTTGG CGGACTGGTC GCGGGGCGAG GACGTCTGCC GCGATGCACG TGGACAGGCG
CGCGATCTGG ACGATACGCA GCGCTGGCAG GCTTCGCTCT GGCGTGCGGT GTGCGCGGAA
CTTGCCGAGG TGGCGGACGA GGCGGGCCAG GCCACGGTCC ATCAACTCTA CCGGGAGCGC
ATCGCGAGCC TGGACACCGC GCCGGCAGAC TTGCCGCGTC GGGTGATCGT CTTCGGCATC
TCGTCGCTTC CGCGCCAGAC ACTGGAGGCG CTGCAGGAGC TGTCGCGTTT CGCCCAGGTG
CTCGTCTTTG TTCACAATCC CTGCGCCTTC TACTGGGCGG ATATCATCGC GGATAAGGAT
CTGCTGCGTG CCGACCCCGG GCGGCGGCCA CGCAAGGCCG GCATGCCCGA GGTCCTGCAT
CCGGAAGAGC TGCACAATCA CGCCCACCCC CTGCTCGCCG CCTGGGGCAA GCAAGGGCGC
GACTATATCG GACTGCTGGA TGCCCACGAG GATCCCCAGG CCCATCCGCA CCAGGCCCTG
GCCCAGGCGG GCGAGCGCAT CGATCTCTTC CGTGGCCCGG CGACCGGATC TCTGCTCGGC
CAGCTCCAGG ACGATATCCT CCACCTGCGT CCGTTGGCCG AGACCCGGGA GGCCTGGCCG
GCGGTCGGCC GCGAAGATGC GTCGCTGCAA TTCCATCTGG CCCACAGCGC CCAGCGCGAG
GTCGAGGTTC TCCATGACCG GCTGCTCGCC GCTTTCTCGG AGGACAGCTC GCTGCGCCCG
CGCGATGTCA TCGTGATGGT GCCGGATATC GACGCTTACG CACCGCACAT CGAGGCCGTG
TTTGGTCGCT TCGATGCCGG CGATGCGCGC CACATTCCCT ATACGGTGGC CGACCAGGGC
GAGCGCGGGC TGGATCCGCT GCTCATCGCC CTGGAGCAGC TTTTGAGCCT GCCCGAGTCG
CGTTGCGGGC TGAGTGACCT GCTCGATCTG CTCGAGGCGC CGGCGTTGCG GCGGCGTTTC
GGGATCACCG AGGCGGACCT GGCCACCCTG CACGGCTGGG CAGAGGAGGC CGGGGTCCGC
TGGGGACTCA ATCGCGAGCA GCGCGCCGGG CTGCAGTTGC CCGAGGGACT GGAGCAGAAT
ACCTGGCGCT TCGGTCTGCG GCGTATGCTG CTCGGCTACG CCGTCGGCGC CGGGGAGGCC
TGGTCCGGGG TCGAACCGTA TCCGCAGGTG GGCGGGCTCG ACGCCGCCCT CGTCGGGCGC
CTGGAGCGGC TGGTCGGCGC CCTGGAAGGC ACCTGGGGCG AACTGCGCGA GGAGGCCACC
CCGGAGCGGT GGGGCGAGCG GCTGCAGCGG CTGCTGGGGA CCTACTTCGA CCCCTCCGGC
GAGGTGGAGT CGTTGACCCT GGAGCGGCTG CGCGATGCCC TGGAGAAGTG GCAGCGTGAC
TGCGAGACCG GGGCGTTCGC CGAGCCGCTG CCTCTGAACG TGGTGCGCGA GCACTGGCTG
CAGGCGCTGG AGGATACGCG ACTGAGCCAG CGTTTCCTGG TCGGGGCGGT GAACTTCTGC
ACCCTGATGC CCATGCGCGC GATCCCCTTC CGCCACGTCT GCCTGCTCGG GATGAACGAT
GGCGACTACC CGCGCAGCCC CACCCCCCTG GATTTCGATC TGATGGCTGA CGATTACCGG
CCCGGCGACC GCTCGCGCCG CGAGGACGAT CGCTACCTCT TCCTGGAGGC GCTCCTCTCG
GCCCGGGATC GGCTCTACAT CAGCTGGATC GGCCGCAGCG TGCGTGATAA CGAGCCACGT
CCGCCTTCGG TGCTGGTCGG TCAGCTGCGC GATCACCTGG CCGCCGGCTG GCGCCTGGCC
GACGAGGAGG AGGCCGGCGG TCTGCTCGAG GCGTTGACCG TGGAGCACCC GCTGCAGCCG
TTCAGCCGCC AGAATTTCCG CACGGAGCCC TCGGCGCGCC ACTACACCTA CGCCCGCGAG
TGGTGGGCGG CCCATCAGGG CGATGAAGCC GGGTCCGGGC CGCGGGTCAC GACGCTGCCC
GAGCGGCCGG TGGAGGATCC GCCGGCGCCG ATCACACCCG AAACCCTGGG GGCGTTGCTC
AAGCAGCCCG TACAGACCTT CTTCAACCGT CGCCTGGGGG TCCGGTTCGA GGATGATCCA
CTGGCCAGCG AGGATCAGGA GCCCTTCGGG CTCGACGGGC TGACACGCTG GCAGATGCGC
GAGGTGCTCT TCCTGGCCGG GCAGGAGGCG GCCGGGGATC CCGAGATGCG CCGCGAACGG
CTGGCCGCCG AGGCGCAGCG GTTGCAGCGC ACCGGCGCGC TGCCGCTGGG CCCGGCCGGT
ACCGTCTGGG CCGAGACGCT TCAGATCGAA GCCGATGAGC AGCTGGAGCG CTACCACCGG
CATCTGGCTA CCTATCCCCA TGAGCTGGAG CCGCTGCAGC GGCTGATGCA CCGCCATGGG
GATTGGCAGC TGGAGGGCGG GGTGGATGGG ATCCGCAGTG ACGGGCAGCG GCGCGTGCGC
CTGACGCACC ACCTCAGCCG CCTGGGGGTC AAGCGCCGGG AGGTACGCTG GCGCTTTGAC
CTGCTTGCCA CGCCGTGGGT CACCCACCTG ATGGCCAACG CGGCCGCGGA GCCGCTGACG
ACCGTGGTCG TCGGACACGA CATCGACGTG GCCCTGGCGC CGCTGGAGGC GGGGCAGGCC
CACGAGCACC TGAGCCAGCT GCTCGCCGGC TGGGCCGAGG CGCAGCGCCG GCCGCTGCCG
GTGCCCTGCC AGCCGACCTG CGCCTGGCTG ACCGCGCAGG ACGAGGAGCG CGGTGATCCG
GCGGCCGCGG CCGAACGGGT CTATGCCGGG GATGACTACA CGTGGGCGGC CGCCGACGCC
CACGATCTGC GCGCCTTCCC GCGGGCGGCG GACTGGCTGG AGGATGCGGC CTTCCCGAGC
TGGCGCGACG CGCTCTACGC GCCCCTGTGG CGGGCGGTCA AGGAGTACGC GGAGGACGGC
GATGGGCACG GCTGA
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| Protein sequence | MAAEPSIEPG FLTIHGNRLE DLRQVAVEWV QRHPLAPLED EVFLVQSNGM AQWLRLALAR
HPDSEQGGCG IAAAVSMQLP ARFLWSVYRA VLGPEGAPRE SPFGKDPLLW RLARLLPALR
DHPGFEPLRG FLADDPDGRK RYQLAARIAD LFDQYQVYRA DWLADWSRGE DVCRDARGQA
RDLDDTQRWQ ASLWRAVCAE LAEVADEAGQ ATVHQLYRER IASLDTAPAD LPRRVIVFGI
SSLPRQTLEA LQELSRFAQV LVFVHNPCAF YWADIIADKD LLRADPGRRP RKAGMPEVLH
PEELHNHAHP LLAAWGKQGR DYIGLLDAHE DPQAHPHQAL AQAGERIDLF RGPATGSLLG
QLQDDILHLR PLAETREAWP AVGREDASLQ FHLAHSAQRE VEVLHDRLLA AFSEDSSLRP
RDVIVMVPDI DAYAPHIEAV FGRFDAGDAR HIPYTVADQG ERGLDPLLIA LEQLLSLPES
RCGLSDLLDL LEAPALRRRF GITEADLATL HGWAEEAGVR WGLNREQRAG LQLPEGLEQN
TWRFGLRRML LGYAVGAGEA WSGVEPYPQV GGLDAALVGR LERLVGALEG TWGELREEAT
PERWGERLQR LLGTYFDPSG EVESLTLERL RDALEKWQRD CETGAFAEPL PLNVVREHWL
QALEDTRLSQ RFLVGAVNFC TLMPMRAIPF RHVCLLGMND GDYPRSPTPL DFDLMADDYR
PGDRSRREDD RYLFLEALLS ARDRLYISWI GRSVRDNEPR PPSVLVGQLR DHLAAGWRLA
DEEEAGGLLE ALTVEHPLQP FSRQNFRTEP SARHYTYARE WWAAHQGDEA GSGPRVTTLP
ERPVEDPPAP ITPETLGALL KQPVQTFFNR RLGVRFEDDP LASEDQEPFG LDGLTRWQMR
EVLFLAGQEA AGDPEMRRER LAAEAQRLQR TGALPLGPAG TVWAETLQIE ADEQLERYHR
HLATYPHELE PLQRLMHRHG DWQLEGGVDG IRSDGQRRVR LTHHLSRLGV KRREVRWRFD
LLATPWVTHL MANAAAEPLT TVVVGHDIDV ALAPLEAGQA HEHLSQLLAG WAEAQRRPLP
VPCQPTCAWL TAQDEERGDP AAAAERVYAG DDYTWAAADA HDLRAFPRAA DWLEDAAFPS
WRDALYAPLW RAVKEYAEDG DGHG
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