| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1252 |
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| Symbol | |
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| ID | 4710500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1358726 |
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| End bp | 1359970 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639855725 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001002829 |
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| Protein GI | 121998042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.368874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCCGAC CTGTAGAGCT GTTCATCGGC CTTCGTTACA CCCGGGCCCG GCGGCGTGGG
CACTTCGTCT CTTTCATCTC GATGACCTCG ATGATCGGCA TCGCCCTCGG CGTTGCAGCG
CTGATCACCG TGCTTTCGGT GATGAACGGT TTCGAGCGGG AGCTGCGCGA GCGGATCCTC
GGAATGGTTT CCCACGCTGA AGTCCACGGC GCTCAGCGTC AGGTGGAGGA TTGGCCCGGG
GTGCTTGAGC GCGCCGAGCG GCATCCCCGC GTTGTCGGTG CCGCCCCCTT CATCGATGGC
GAGGTCATGG TGACCCGTGG GGGCCAGGTC AGCGGGACTT TGATCCGTGG CGTGGATCCC
GATCTAGAAC CGAGTGTCTC CGATGTCCTG GATCAGGTGA TCGCCGGGGA GGCCAAGCTG
GAGGCCGGGG AGTTCGGGCT GATCATGGGC TCGGCCCTGG CTCGCGAACT CGGTGCACGA
GTGGGTGACC GCATCACCGT GATCACCCCC GAGGCCCGTG TCTCCGTGGC CGGTGTGACG
CCCCGCATGC GGCGGTTCAC GCTGACCGGT ATCTTCGAAG TGGGGATGCA CGAGTACGAC
CGGACCTTGG CCATCGCCCA CATCGAGGAT ATGGCGCGGG TCAAGGGGAT GGGGGATGGG
GTCAGCGGGA TCCGGCTCAA GCTCGACGAT ATGATGGCTG CCCCTTGGTT GGCCCGCGAG
GTGGCCGACG ACCTGCCGGG GCAATACCGG GTGGTGGACT GGACCCGGCA GCACGCCAAT
TTCTTCCGCG CAGTGCAGAC CGAGAAAACG GTCATGTTCG TCATTCTGGC GCTGATCGTC
GCGGTAGCCG CCTTTAACAT CGTTTCGACC CTGGTCATGG TGGTCCGCGA TAAACAGTCC
GATATCGCCA TATTGCGAAC GGTGGGACTG AGCCCGGGCA GCGTCATGGC GGTCTTCATT
ATCCAGGGCG CGGTGATTGG CGTGGTAGGA ACCCTGCTCG GGGTCGCCGG CGGTGTGTCA
CTGGCGCTCA ATGTCGAGAA CATCGTCCCG GCGGTGGAGC AGTTGCTCAA CTTCGAGTTC
CTGCCCGCCG ACGTCTACTA CATCAGCGAT CTGCCCTCGG AGTTGCGCGG CGAGGACGTT
GGGCGGATCA CGGTACTGGC ACTGGCGCTG TCGCTAGTCG CTACGCTCTA CCCGGCGTGG
CGGGCGGCGC GTACAGAGCC CGCGGAGGCG TTGCGTTATG AATGA
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| Protein sequence | MFRPVELFIG LRYTRARRRG HFVSFISMTS MIGIALGVAA LITVLSVMNG FERELRERIL
GMVSHAEVHG AQRQVEDWPG VLERAERHPR VVGAAPFIDG EVMVTRGGQV SGTLIRGVDP
DLEPSVSDVL DQVIAGEAKL EAGEFGLIMG SALARELGAR VGDRITVITP EARVSVAGVT
PRMRRFTLTG IFEVGMHEYD RTLAIAHIED MARVKGMGDG VSGIRLKLDD MMAAPWLARE
VADDLPGQYR VVDWTRQHAN FFRAVQTEKT VMFVILALIV AVAAFNIVST LVMVVRDKQS
DIAILRTVGL SPGSVMAVFI IQGAVIGVVG TLLGVAGGVS LALNVENIVP AVEQLLNFEF
LPADVYYISD LPSELRGEDV GRITVLALAL SLVATLYPAW RAARTEPAEA LRYE
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