Gene Hhal_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1236 
Symbol 
ID4710340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1342269 
End bp1343300 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID639855709 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_001002813 
Protein GI121998026 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.391117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCC AGATAACTCT GTCGCTGGAC GCCATGGGCG GGGATCACGG ACCAAGTGTC 
GTGGTCCCCG CTGCTTTGCA GGCCCTGGAG CGTCATCCGC ACCTTCATCT GGTACTGGTC
GGGCAGGAAG AGACGCTGCG CGAGCACCTC CAGGCTGGAA ATCAGGGGGA TAGCGGGCGT
CTGAGCATCC GCCACTGCAC CCAGGTCGTG GCCATGGACG AGCCGCCCTC CCACGCGCTG
CGCTCCAAGA AGGACTCGTC CATGCGGGTC GCCCTGGAGA TGGTCAAGAC CGGGGAGGCA
GACGGTTCGG TCAGTGCCGG CAATACGGGC GCGCTGATGG CGACCGCGCG CTATCTGCTC
AAGACCCTTC CGGGGATCGA CCGGCCGGCG ATCATGAGCA CGATCCCCAC GCTCGGGGGT
GCCACGCACA TGCTCGATCT CGGTGCCAAC GTCGATTGCA CCGGCGAGCA CCTCTTCCAG
TTCGGGGTGA TGGGTGCAGT AGCGGCCGAG GCAGTGCACG GGCTGGAGCG TCCGCGTGTC
GGCCTGCTGA ACATCGGCGA AGAAGAGATC AAGGGCAACG AGCAGGTCAA GCACGCGGCA
GAACTCCTGC TCGAGTCCGA AGAGATCCAC TACGCCGGGT ATATCGAGGG CGACGGCATC
TACAAGGGCG AGGCCGATGT GGTCGTCTGC GACGGTTTCG TCGGCAACGT GGCGCTGAAG
ACCAGTGAGG GCGTGGCGAC GCTGATCTCC GAGTACATGC GGATGGAGTT CCGGCGCAAT
CTCCTGTCGA AGATCGCCGG GGTTGTCGCG CTGCCGGTGC TGCGCGCCCT GCGACGGCGG
ATCGACCCCC GTCAGTACAA CGGGGCGAGT CTGCTCGGCC TACGGGGAGT CGCCCTCAAG
AGTCACGGCT CGGCAGACAG CTTTGCCTTC GGCCGGGCCA TTGACACCGC GGTTCGCGAG
GCCGAGCAAG GAGTCCCGGA TTTGATCAAT GCGCGTATCG AGCGGCTGCT GGGGGCGAAG
GAAGGGGCGT GA
 
Protein sequence
MTSQITLSLD AMGGDHGPSV VVPAALQALE RHPHLHLVLV GQEETLREHL QAGNQGDSGR 
LSIRHCTQVV AMDEPPSHAL RSKKDSSMRV ALEMVKTGEA DGSVSAGNTG ALMATARYLL
KTLPGIDRPA IMSTIPTLGG ATHMLDLGAN VDCTGEHLFQ FGVMGAVAAE AVHGLERPRV
GLLNIGEEEI KGNEQVKHAA ELLLESEEIH YAGYIEGDGI YKGEADVVVC DGFVGNVALK
TSEGVATLIS EYMRMEFRRN LLSKIAGVVA LPVLRALRRR IDPRQYNGAS LLGLRGVALK
SHGSADSFAF GRAIDTAVRE AEQGVPDLIN ARIERLLGAK EGA