Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1236 |
Symbol | |
ID | 4710340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1342269 |
End bp | 1343300 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855709 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | YP_001002813 |
Protein GI | 121998026 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.391117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAGCC AGATAACTCT GTCGCTGGAC GCCATGGGCG GGGATCACGG ACCAAGTGTC GTGGTCCCCG CTGCTTTGCA GGCCCTGGAG CGTCATCCGC ACCTTCATCT GGTACTGGTC GGGCAGGAAG AGACGCTGCG CGAGCACCTC CAGGCTGGAA ATCAGGGGGA TAGCGGGCGT CTGAGCATCC GCCACTGCAC CCAGGTCGTG GCCATGGACG AGCCGCCCTC CCACGCGCTG CGCTCCAAGA AGGACTCGTC CATGCGGGTC GCCCTGGAGA TGGTCAAGAC CGGGGAGGCA GACGGTTCGG TCAGTGCCGG CAATACGGGC GCGCTGATGG CGACCGCGCG CTATCTGCTC AAGACCCTTC CGGGGATCGA CCGGCCGGCG ATCATGAGCA CGATCCCCAC GCTCGGGGGT GCCACGCACA TGCTCGATCT CGGTGCCAAC GTCGATTGCA CCGGCGAGCA CCTCTTCCAG TTCGGGGTGA TGGGTGCAGT AGCGGCCGAG GCAGTGCACG GGCTGGAGCG TCCGCGTGTC GGCCTGCTGA ACATCGGCGA AGAAGAGATC AAGGGCAACG AGCAGGTCAA GCACGCGGCA GAACTCCTGC TCGAGTCCGA AGAGATCCAC TACGCCGGGT ATATCGAGGG CGACGGCATC TACAAGGGCG AGGCCGATGT GGTCGTCTGC GACGGTTTCG TCGGCAACGT GGCGCTGAAG ACCAGTGAGG GCGTGGCGAC GCTGATCTCC GAGTACATGC GGATGGAGTT CCGGCGCAAT CTCCTGTCGA AGATCGCCGG GGTTGTCGCG CTGCCGGTGC TGCGCGCCCT GCGACGGCGG ATCGACCCCC GTCAGTACAA CGGGGCGAGT CTGCTCGGCC TACGGGGAGT CGCCCTCAAG AGTCACGGCT CGGCAGACAG CTTTGCCTTC GGCCGGGCCA TTGACACCGC GGTTCGCGAG GCCGAGCAAG GAGTCCCGGA TTTGATCAAT GCGCGTATCG AGCGGCTGCT GGGGGCGAAG GAAGGGGCGT GA
|
Protein sequence | MTSQITLSLD AMGGDHGPSV VVPAALQALE RHPHLHLVLV GQEETLREHL QAGNQGDSGR LSIRHCTQVV AMDEPPSHAL RSKKDSSMRV ALEMVKTGEA DGSVSAGNTG ALMATARYLL KTLPGIDRPA IMSTIPTLGG ATHMLDLGAN VDCTGEHLFQ FGVMGAVAAE AVHGLERPRV GLLNIGEEEI KGNEQVKHAA ELLLESEEIH YAGYIEGDGI YKGEADVVVC DGFVGNVALK TSEGVATLIS EYMRMEFRRN LLSKIAGVVA LPVLRALRRR IDPRQYNGAS LLGLRGVALK SHGSADSFAF GRAIDTAVRE AEQGVPDLIN ARIERLLGAK EGA
|
| |