Gene Hhal_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1220 
SymbolglyQ 
ID4710418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1324370 
End bp1325284 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID639855693 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_001002797 
Protein GI121998010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGAGT TACCGCGGGA CTTTCAGGAA CTCATCCTCA ACCTACAGCA GTACTGGGCC 
CGGCAGGGCT GTGTGGTATT GCAGCCGCTG GACATCGAGG TGGGCGCCGG GACCTTCCAC
CCGGCAACCT TCCTGCGCGC CGTGGGCCCG GAGCCCTGGC ACGCTGCCTA TGTCCAGCCG
TCACGCCGGC CCACCGACGG GCGCTACGGC GACAACCCCA ACCGCCTGCA GCACTACTAC
CAATTCCAGG TGGTGCTCAA GCCATCGCCG GCGGATTTCC AGGAGCGCTA CCTGGGCTCC
CTGGAGCAGC TTGGCATCGA TCCACAGATC CACGACATCC GCTTCGTCGA GGACGACTGG
GAGTCCCCCA CCCTGGGCGC CTGGGGCCTG GGCTGGGAGG TGTGGCTCAA CGGCATGGAG
ATCAGCCAGT TCACCTACTT CCAGCAGGTG GGCGGGCTCG ACTGCCGGCC GGTGATGGGC
GAGATCACCT ACGGGCTGGA GCGCATCGCC ATGTACCTGC AGAACGTGGA GAGCGTCTAC
GACCTGGTCT GGACGCACAC CGACGCGGGA CCGGTGACCT ACGGCGACGT CTTCCTGCAG
AACGAACGCG AGCAGTCGGC GTACAACTTC GAGCAGGCGC CGGTGGAGGC CCTGCTTGCG
GCGTTCGGAC ACCAGGAACA GGAGTGCCGA CGCCTCGTCG AGGAGGGCCT GCCGCTGCCA
GCCTACGAGC AGGTCCTCAA GGCCTCGCAC ACGTTTAACC TGCTCGACGC GCGGGGCGCC
ATCTCGGTCA CCGAGCGCCA GGGCTACATC CTGCGGGTAC GCAATCTGGC CCGCACCGTG
GCGCAGGGCT ACTACCAGTC GCGCGAGGAA CTTGGCTTTC CGCTGCTGCA GGATAAGGAG
TCCACCCATG GCTGA
 
Protein sequence
MAELPRDFQE LILNLQQYWA RQGCVVLQPL DIEVGAGTFH PATFLRAVGP EPWHAAYVQP 
SRRPTDGRYG DNPNRLQHYY QFQVVLKPSP ADFQERYLGS LEQLGIDPQI HDIRFVEDDW
ESPTLGAWGL GWEVWLNGME ISQFTYFQQV GGLDCRPVMG EITYGLERIA MYLQNVESVY
DLVWTHTDAG PVTYGDVFLQ NEREQSAYNF EQAPVEALLA AFGHQEQECR RLVEEGLPLP
AYEQVLKASH TFNLLDARGA ISVTERQGYI LRVRNLARTV AQGYYQSREE LGFPLLQDKE
STHG