Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1178 |
Symbol | |
ID | 4710211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1283701 |
End bp | 1284813 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855651 |
Product | polysaccharide deacetylase |
Protein accession | YP_001002755 |
Protein GI | 121997968 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCCAC GCACCTGGCT GCCGGCTGGT GTCACCCTGG CCGCCCTGAC GGCAGGCACC AGCCACGCGC TCGGGCAGAA CCCACCGGAG AAGGATCCGG AAGCCGACCC CCAGGGCAGC GCAGTGGTCT TCATGTACCA CCGCTTCGGC GAGGACCGCT ACCCCTCGAC CAGCGTCAGC CTCGAGCAGT TCGAGGCGCA GCTCGACTAC CTCGAGGAGG AGGACTTCAA CGTCTGGCCG ATCGAGTGGG TCATCGACAT CCTACGCCAC GGCGGCGAGA TCCCCGAGCG CACGGTGTCG ATCACGGTCG ACGACGCCTA CGCGTCCGTC TACGAAGAGG CGTTCCCGCG CCTGAAAGAG CGCGACTGGC CGATGACCGT CTTCGTCGCC ACGGACGACG TCGACTCCGG CCGCTCCGCC TACATGGACT GGGATCAGAT GCGCGAGATG CGCGACTCCG GGCTGGTTCG CTTCGCCAAC CACTCCTCGA GCCACGACTA CCTGGTCCGC CGGGACCACG ACGAGGAGGA CGATGAGGCG TGGCGGGCGC GCATGCGCGA GGACGTCAAC AACGCCCAGA GACGCCTGCA GGAGGAGCTC GGCGAGGATG TGAACACCGA CCCCAAGCTC TACGCCTATC CGTTCGGCGA ATACGATCCG GAACTCGCCG AACTGCTGCG CGACAAGGGG TACACCGCCT TCGGGCAGCA CTCGGGGGCC GTCGGACCGC TCAGTGACAA GCGTGCCCTG CCGCGCTTCG CGGTCAACGA GCAATTCGGC GACATGGACG ACTTCGAGCT GCGCGCCAAC AGCCTACCGC TGCCGATCGA GACGATGGAG CCCTTCGATC CGCTCCTCGA CGACGACAAC AACCCACCCC GCATGGAGAT CCAGCTGGCC GAGGATCACG ATGTCGGCGC CGGCCGGCTG AACTGCTTTG CCAGCGGTCA GGGGGCCATG GAGGTGGAGT GGTTGGACGA CGAGCAGACG CGTTTCGCCG TCCAGGCCGA GGAGCCCTTC GGCCAGGGCC GTGCCCGCTA TAACTGCACA GCCCCGCACC GCGACGGCAG CGGGCGTTTC TTCTGGTTCA GCAAGCAGTG GCTGAACGAC TGA
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Protein sequence | MHPRTWLPAG VTLAALTAGT SHALGQNPPE KDPEADPQGS AVVFMYHRFG EDRYPSTSVS LEQFEAQLDY LEEEDFNVWP IEWVIDILRH GGEIPERTVS ITVDDAYASV YEEAFPRLKE RDWPMTVFVA TDDVDSGRSA YMDWDQMREM RDSGLVRFAN HSSSHDYLVR RDHDEEDDEA WRARMREDVN NAQRRLQEEL GEDVNTDPKL YAYPFGEYDP ELAELLRDKG YTAFGQHSGA VGPLSDKRAL PRFAVNEQFG DMDDFELRAN SLPLPIETME PFDPLLDDDN NPPRMEIQLA EDHDVGAGRL NCFASGQGAM EVEWLDDEQT RFAVQAEEPF GQGRARYNCT APHRDGSGRF FWFSKQWLND
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