Gene Hhal_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1165 
Symbol 
ID4710156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1271844 
End bp1272623 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID639855638 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001002742 
Protein GI121997955 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCG ATTACATCAT GCTCGCCGAT ACAACACGCT GCATCGACTG CAAGGCGTGC 
GTCGTGGCCT GCCGCGCGGA GTGGGATGTA CCGCTCGGCC ATAGCCGGGA CTGGGTGGCT
AGCGCTGAGA CGCGCACCGA GCAGGGGCAG CCGCAGCTGC ACTTCTTCCC GGGACGATGC
CAGCACTGTG ATGAGGCGCC GTGCATCGAC GCGTGCCCCA CGGGTGCCGT GTTCAAACGC
CAGGATGGGC TGGTCCTTCT TGAGCCGGCG CTGTGCTCCG GGTGTGAGCT CTGCGTGCCG
GCGTGTCCCT ACGGGGCCCG CTGGCTCGAT CCGCGTACCG GGGTGGTGGA TTCGTGCACG
TTCTGCCAGC CGCTGATCGA CGCCGGTCGG CAGCCGGCGT GCGTCGCCAG TTGTCCGACG
GACGCCCTGC TCTTCGGCGA TGCGGCGGAC CCGGACAGTG AGGTGGCCCG GCGCCTTGAG
GAAGATGGGG ACTGGTTCAC GCTGAGCACC GACGAGGTCG ATTGCAAGCC ACGGCACTAT
TATCGCACCG GTGACCGGGA GGTGCCCGAG GCGATGCTGC CGGAGCCCCC GGACCCGTAT
TGGACGCAGC GGGCATCGGA GTCCCTGGTC AATCCGTTGG CCAAGCTGGG GATCGGTGGC
ATGGCGGCGC TGTTCGCGGT AGCCGGAGCC AAGCGATTCC TCGACCGCCG GCGCGGGATC
GCGGAGCAGG AGCCGTCGGG CGAGAAGCAG GCGACTCCGC GAGGGGGTGA CGATGAGTGA
 
Protein sequence
MSRDYIMLAD TTRCIDCKAC VVACRAEWDV PLGHSRDWVA SAETRTEQGQ PQLHFFPGRC 
QHCDEAPCID ACPTGAVFKR QDGLVLLEPA LCSGCELCVP ACPYGARWLD PRTGVVDSCT
FCQPLIDAGR QPACVASCPT DALLFGDAAD PDSEVARRLE EDGDWFTLST DEVDCKPRHY
YRTGDREVPE AMLPEPPDPY WTQRASESLV NPLAKLGIGG MAALFAVAGA KRFLDRRRGI
AEQEPSGEKQ ATPRGGDDE