| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1056 |
|---|
| Symbol | gltB |
|---|
| ID | 4709818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1140807 |
|---|
| End bp | 1145267 |
|---|
| Gene Length | 4461 bp |
|---|
| Protein Length | 1486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855527 |
|---|
| Product | glutamate synthase subunit alpha |
|---|
| Protein accession | YP_001002634 |
|---|
| Protein GI | 121997847 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACG AAAACGCACC CGGCCTGTAC CGGCCCAGCT TCGAACGAGA CAACTGCGGT
TTCGGGCTGA TTGCCCATAT GGATGGTAAC CCCAGCCATT GGCTCATCGA AACCGCCGTA
GCCGCCCTCG GGCGACTCAC CCACCGCGGC GCGGTAGCCG CCGACGGCAA GACCGGCGAC
GGCTGCGGCC TGCTACTGAC CAAACCCGAC GCCTTCCTGC GGGCGGTGGC GCACGAGGCC
GGGCTGGACC TCGACGAGCA GTTCGCCGTG GGCAGCCTGT TCCTCCATCC CGAGGAGGGC
TTCGCCGAAG CGGCGCGCGA GGCGCTGCGC CAAGCGCTGC GCAGCCAAGG GCTGGAGCCG
GCCGGATTCC GCGAGGTGCC GGTAGACACC TCGGCGCTGG GGGCCCAGGC CCTCCAGACC
TGTCCCCGGA TCGAGCAAGC CTTCGTCAAT GCCGATCCGG GGATGGAGGC CCAGGACCTG
GAGCGGCGGC TGTTCATCGC CCGACGACTC ACCGAGAAGG CGATCAGCAG CGAAGACGAG
GTCTTCTACG TCGCCAGCCT CTCGGGCCGG GTCCTCTCTT ACAAGGGGCT GGTGATGCCG
GATTACCTGC CCGCGTTCTA CCAGGACCTC CAGGACCCGC GCCTCGCCTC TTCCCTCTGC
GTCTTCCACC AGCGTTTCTC CACCAACACC CTGCCCCAGT GGCGCCTGGC CCAACCCTTC
CGGTATCTGG CCCACAACGG CGAGATCAAT ACCATCCAGG GCAACCGTAA TTGGGCCAAC
GCCCGGGCCT TTACGCTCAA CACGCCGCTC ATCCCCGACA TGGAAGCGGT CCACCCGCTG
GTCAACAGCG AGGGGTCCGA CTCCTCGAGC CTCGACAACA TGCTCGATGT GCTCCTCCAG
GGTGGGATGG ACATCTTCCG CGCCATGCGC CTGCTGATGC CGCCGGCTTG GCAGAACGTC
GACTCCATGG ACGCGGACCT GCGGGCGTTC TACGAGTACC ACTCGATGCA CTGCGAGCCC
TGGGACGGGC CGGCCGGCAT CGTCCTCACC GACGGCCGCC ACGCCGCCTG CTCCCTGGAT
CGCAACGGGC TGCGTCCGGC GCGCTGGGTG ATGACCCGCG ACCGCCACAT CACCCTGGCC
TCGGAGATCG GCGTCTGGGA CTACGACCCC GCCGAGGTAG TGGCCAAGGG ACGGCTCAAA
CCCGGCGAGA TGCTCGCCGC CGACACCGAG ACCGGGCAGC TGCTCACCCC CGAGCAGATC
GACGAGCGGC TGATGCGGCG CAAGCCCTAC AAGGCCTGGC TCAGTGAGCA CCTGCGCCGC
CTCGAGCCCC TGGCCGGGTT CGACGGCAAG AGCCCGCAGC TCGACCAGAA CGCCCTCGAT
GTCCATCAGA AGCTCTTTGG CATCTCGTTC GAGGAGCGCG ACCAGGTGAT GAAGCCCATG
GCCGAGGGCG GCCAGGAGGC CGTCGGCTCC ATGGGCGACG ACACCCCGCT GCCGGTACTC
TCGCGCAGGG TCCGCGCGCT GTACGACACC TTCCGCCAGC AGTTCGCCCA GGTCACCAAC
CCGGCCATCG ACCCGCTGCG CGAGCGGATC GTGATGTCGC TCGAGACCTG CCTGGGGCGC
GAGAAAAACC TGTTCGACGA ATCCGAGGAC CACGCCAAGC GCATCACGGT GGACTCGCCG
GTGCTCTCCG GGGCCAAGTT CGCCGCCATC AAGGCGCTGG ATGATCCGGA GTACGCCCAT
ACGGTCATCG ACCTGACCTA CGACCCCAGT CAGCTGAACC TGCGCAGTGC CATCGAGGCG
GTCGCCGCCG AGGCCGAGGC GGCCGTCCGG GCCGGCTCCA CGCTGGTGGT GCTCTCCGAC
CGCCGGGTTG AGCGCGGCCG GCTGACCATC CACGCTCTGC TCGCCACCGG CGCCGTGCAC
CACCGCCTGG TGGCCCGGGG CCTGCGCTGC AACGCCAACC TCATCGTCGA GACCGGCACC
GCCCGCGATC CCCACCATAT CGGCTGCCTG ATCGGGTACG GCGCCACCTG CGTCTACCCC
TACCTGGCCT ACGAAGTGGT GGCCGAGATG GCCCGCTCGG GGCGGATGGA GGGCGACGTC
GAGGCGCTCT GCCTCAACTA TCGCAAGGGG CTGAACAAGG GGCTGTACAA GATCCTCTCC
AAGATGGGGA TCTCCACCAT CGCCAGCTAC CGCGGCGCGC AGCTGTTCGA GTCCGTGGGC
CTGGCCGACG AGGTGGTGGA CCTGTGCTTC ACCGGCACCA CCAACCGCAT CCAGGGCATG
AACTTCTCCG ACCTGGAGGC CGACGCCCGC GAGCTGGCCC GCCGCGCCCA CCGAGCCACG
GAGCTCCTCG ATCAGGGCGG CGTCTTCAAG TACGTCCACG GCGGCGAGTA CCACTGCTAC
AACCCCGAGG TGGTCTCCTA CCTCCAGCAG GCGGTGGAGG ACGGCGACTA CGCCACCTAC
AAGCGCTTCG CCGACGCGGT CAACCAGCGC CCCACCGCCA CCCTGCGCGA CCTGCTCGGG
CTGAAGGTGC CGGATCAGGG CATCGCGGTG GACGAAGTGC AGCCCATCGA CGACATCCTC
ACCCGGTTCG ACTCCGCCGG GATGAGCCTC GGCGCGCTCT CACCGGAGGC CCACGAGGCG
CTGGCCATGG CCATGAATCG CCTCGGTGGC CGGTCGAACT CCGGCGAGGG CGGCGAGGAC
CCGGCCCGCT ACGGCACCGA CCGGGTCTCG AAGATCAAGC AGATCGCCTC GGGGCGCTTC
GGCGTGACCC CGCACTACCT GGTCAACGCC GAGGTCCTGC AGATCAAGGT GGCCCAGGGC
GCCAAGCCCG GCGAGGGGGG GCAGCTGCCC GGGCACAAGG TCAACGAGAT GATCGCCCGG
CTGCGCTACT CCAAGCCCGG CGTGGCCCTC ATCTCGCCGC CGCCTCACCA CGACATCTAC
TCCATCGAGG ACCTGGCGCA GCTGATCTTC GACCTCAAGC AGGTCAACCC GGAGGCCCAG
GTCTCGGTCA AGCTGGTGGC CGAGGCCGGT GTCGGCACCG TGGCCGCCGG CGTGGCCAAG
GCCTACGCCG ACCTGATCAC CATCGCCGGC TACGACGGCG GTACCGGCGC CAGCCCGCTG
ACCTCGGTGA AGTACGCCGG TGGCCCGTGG GAGTTGGGCC TGACCGAGAC CCACCAGACC
CTGCGCGCCA ATGACCTGCG CGACAAAGTA CGCCTCCAGG CCGACGGCGG CATGAAGACC
GGTCTCGACG TGGTCAAAGG GGCCATCCTC GGCGCCGAGA GCTTCGGCTT CGGCACCGCG
CCCATGGTGG CACTCGGCTG CAAGTACCTG CGCATCTGCC ATCTGAACAA CTGCGCCACG
GGCGTGGCCA CCCAGGACAA CGTCCTGCGG CTCAAGCACT TCGTCGGCAC CGCCGAGAAG
GTGGCCAACT ACTTCCGCTT CGTCGCCGAA GAAACCCGCG AGTGGCTCGC GCTTCTGGGT
GTCCGCCGGC TGGAGGATCT CATCGGCCGA ACCGATCTGC TGGAGGTCCT GCCCGGCGAG
ACCGAGCGCC AGGGGCGCCT GGACCTCTCG CCGATCCTCT CCGACGGCGG GGTGCCGGAG
GACAAGCCCA AGCGCTGCCT GGAGCCGTCC AACGTGCCCT TCGACAAGGG CGAGCTCGCC
GAGCAGATGG TCGCCGACTG CCTGCCGACC ATCGAGGCCG GCTCCGGCGG CGAGTTCCAC
TACACGCTGC GCAACAACAA CCGCTCCATC GGGGCGCGGC TCAGCGGCGA GATCGCCCGC
CGCCACGGCA ATCAGGGCAT GGCGGACCAC CCCATCACCC TGCGCCTGAC CGGGACCGCC
GGGCAGAGCT TCGGCGTGTG GAACGCCGGC GGCTTGCACA TGGTGCTCGA GGGGGACGCC
AACGACTACG TCGGCAAGGG CATGGCCGGC GGCAAGCTGG TCCTCTACCC GCCCCAGGGC
AGCCGGTTCG AGGCCCGCAA GACCACCATC ATGGGCAACA CCTGCCTCTA CGGTGCCACC
GGTGGCCGGC TCTACGCCGC CGGCACCGTC GGCGAGCGCT TCGGGGTCCG CAACTCGGGG
GCCACCGCGG TGGTGGAGGG GGTCGGCGAT CACGGCTGCG AGTACATGAC CGGCGGCGTG
GTCTGCGTGC TCGGACCCAC CGGCGTCAAC TTCGGCGCCG GCATGACCGG CGGTCTCGCC
TTCGTCCTCG ACGAGGCCGG CACTTTCGCC GATCGCTACA ACCACGAGCT CATCGACATC
CACCGACTGC AGTCGGAGAA CATGGAGGCT CACCGCAACT ACCTGCGCGA GCTGATCCGC
GAGTTCGTGG CCGAGACCGG CAGCGTGTGG GGACGGGCGG TCCTCGACGA CTTCCGCGGC
TACCTGCCCC GCTTCTGGCT GGTCAAGCCG AAGGCCGCCG ATCTTCACAC CATCCTCGAT
ACGCTCCGCC AGGCGGCCTG A
|
|---|
| Protein sequence | MTDENAPGLY RPSFERDNCG FGLIAHMDGN PSHWLIETAV AALGRLTHRG AVAADGKTGD
GCGLLLTKPD AFLRAVAHEA GLDLDEQFAV GSLFLHPEEG FAEAAREALR QALRSQGLEP
AGFREVPVDT SALGAQALQT CPRIEQAFVN ADPGMEAQDL ERRLFIARRL TEKAISSEDE
VFYVASLSGR VLSYKGLVMP DYLPAFYQDL QDPRLASSLC VFHQRFSTNT LPQWRLAQPF
RYLAHNGEIN TIQGNRNWAN ARAFTLNTPL IPDMEAVHPL VNSEGSDSSS LDNMLDVLLQ
GGMDIFRAMR LLMPPAWQNV DSMDADLRAF YEYHSMHCEP WDGPAGIVLT DGRHAACSLD
RNGLRPARWV MTRDRHITLA SEIGVWDYDP AEVVAKGRLK PGEMLAADTE TGQLLTPEQI
DERLMRRKPY KAWLSEHLRR LEPLAGFDGK SPQLDQNALD VHQKLFGISF EERDQVMKPM
AEGGQEAVGS MGDDTPLPVL SRRVRALYDT FRQQFAQVTN PAIDPLRERI VMSLETCLGR
EKNLFDESED HAKRITVDSP VLSGAKFAAI KALDDPEYAH TVIDLTYDPS QLNLRSAIEA
VAAEAEAAVR AGSTLVVLSD RRVERGRLTI HALLATGAVH HRLVARGLRC NANLIVETGT
ARDPHHIGCL IGYGATCVYP YLAYEVVAEM ARSGRMEGDV EALCLNYRKG LNKGLYKILS
KMGISTIASY RGAQLFESVG LADEVVDLCF TGTTNRIQGM NFSDLEADAR ELARRAHRAT
ELLDQGGVFK YVHGGEYHCY NPEVVSYLQQ AVEDGDYATY KRFADAVNQR PTATLRDLLG
LKVPDQGIAV DEVQPIDDIL TRFDSAGMSL GALSPEAHEA LAMAMNRLGG RSNSGEGGED
PARYGTDRVS KIKQIASGRF GVTPHYLVNA EVLQIKVAQG AKPGEGGQLP GHKVNEMIAR
LRYSKPGVAL ISPPPHHDIY SIEDLAQLIF DLKQVNPEAQ VSVKLVAEAG VGTVAAGVAK
AYADLITIAG YDGGTGASPL TSVKYAGGPW ELGLTETHQT LRANDLRDKV RLQADGGMKT
GLDVVKGAIL GAESFGFGTA PMVALGCKYL RICHLNNCAT GVATQDNVLR LKHFVGTAEK
VANYFRFVAE ETREWLALLG VRRLEDLIGR TDLLEVLPGE TERQGRLDLS PILSDGGVPE
DKPKRCLEPS NVPFDKGELA EQMVADCLPT IEAGSGGEFH YTLRNNNRSI GARLSGEIAR
RHGNQGMADH PITLRLTGTA GQSFGVWNAG GLHMVLEGDA NDYVGKGMAG GKLVLYPPQG
SRFEARKTTI MGNTCLYGAT GGRLYAAGTV GERFGVRNSG ATAVVEGVGD HGCEYMTGGV
VCVLGPTGVN FGAGMTGGLA FVLDEAGTFA DRYNHELIDI HRLQSENMEA HRNYLRELIR
EFVAETGSVW GRAVLDDFRG YLPRFWLVKP KAADLHTILD TLRQAA
|
|---|
| |