Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1049 |
Symbol | |
ID | 4709805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1134875 |
End bp | 1135762 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639855520 |
Product | phosphoribulokinase |
Protein accession | YP_001002627 |
Protein GI | 121997840 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000381881 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGA AGCATCCCAT CATCGCGGTC ACAGGCTCCT CCGGGGCAGG GACCAGCACC GTCAAGAACG CCTTCGAGCA CATCTTCCGC CGTGAGCAGG TCACCCCGGT GGTGATCGAG GGCGACGCCT TCCACCGCTT CAACCGCCAG GAGATGCGTG ACCAGCTGGC CCGAGCCGCC GAGGAGGGAC GCAACCTGAG CCACTTCGGG CCCGAGGCCA ACGTCTTCGG TGAACTCGAG AACTCCTTCC ACCGCTACGG CCAGGAAGGG ATCTGTCGGC GCCGCAAGTA TCTCCACAGC GACGAGGAGG CGGAGCCCTA CGGCCTGCAG CCCGGCGAGT TCACCGACTG GGAGGACGCC GGCCAGGACA GCGACCTGCT GTTCTACGAG GGGCTGCACG GCGGCGTGGT GACCGAGGAG CACAACGTCG CACAGCACGT GGACCTGCTC GTCGGCGTGG TGCCCATCGT CAACCTGGAG TGGATCCAGA AGATCCACCG CGACGGCGCC GAGCGCGGCT ACACGGCGGA GAAAACCGTG GACACCATCC TGCGGCGCAT GCCGGACTAC GTGAACTACG TTACGCCGCA GTTCTCGCGG ACGGACATCA ACTTCCAGCG CGTACCCACG GTGGACACCT CCAACCCGTT CATTGCCCGG GACGTGCCGA CACCGGACGA GTCCTTCACG GTGATCCGCT TCCGTCAGCC GGAGCGCTTC GGGATCGACT TCCCGTACCT GCTGAACATG ATCCCGGACT CGTTCATGTC CCGGCGCAAC ACCATGGTGG TCCCCGGCGG GAAGACCGGC TTCGCCATGG AGCTGATCAT GACGCCGATC ATCCACGAGT TTGTCGAGCG CAGCCGCAAG CTCAAGGGCA CCCGTTAG
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Protein sequence | MSEKHPIIAV TGSSGAGTST VKNAFEHIFR REQVTPVVIE GDAFHRFNRQ EMRDQLARAA EEGRNLSHFG PEANVFGELE NSFHRYGQEG ICRRRKYLHS DEEAEPYGLQ PGEFTDWEDA GQDSDLLFYE GLHGGVVTEE HNVAQHVDLL VGVVPIVNLE WIQKIHRDGA ERGYTAEKTV DTILRRMPDY VNYVTPQFSR TDINFQRVPT VDTSNPFIAR DVPTPDESFT VIRFRQPERF GIDFPYLLNM IPDSFMSRRN TMVVPGGKTG FAMELIMTPI IHEFVERSRK LKGTR
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