Gene Hhal_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1030 
Symbol 
ID4709644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1106436 
End bp1107230 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID639855501 
Productalpha/beta hydrolase fold 
Protein accessionYP_001002608 
Protein GI121997821 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC CGGTGCAACT CTCCCTGACC ACCCGCGGCA CGGGGGCGCC GCTGTTGCTG 
CTCCACGGGC TCTACGGCAG CAGTGGCAAC CTCAACCGCT TCACGCGGCG CTTCGCCCAC
GACTATCGGG TGCTGGCCCC AGACCTGCGC AACCACGGCC GCTCGCCCCA TCGGCCCGGC
ATGGATTACC CGACGCTGAC CGAGGATGTC GTGGCGCTGC TCGACCGGGA AGGCATCGAG
CGGGTGGCCG TGCTCGGTCA CTCCATGGGC GGCAAGGTGG CCATGACCCT CGCACTGACC
CGACCGCAGC GGGTAGCGGC CGTGATCGCT GCGGACATCG CCCCGGTGAC CTACCAGCAT
AACCACGGCA CGCTGATCGG GGCGCTGCAG CAGGTCGACG TGGCCGGCGC AGGCAATCGG
CGCGAAGTGG ATGCAGCGCT GGCGGCAGCG ATCGACTCGC CGGCGGTGCG CCAGTTCCTC
CTCACCAACC TGGTCCCCGC TGACGAGGGC GGCTACCGTT GGCGTATCCC TCTCCAGTTC
CTCGCCGACG CGGTCCCGGA TATTCAGGGC TTCCCGGAGC TGGAGGGCGC CTACGACGGT
CCGGCGCTGT TCCTCTACGG GACCGCCTCC GACTACTTCG ATCCCGATCG CCACCGGGAT
GCCGTGGCGG CGTACTTCCC GAAGGCCGAA TACGCGGCTC TCGAGGGGGC GGGCCACTGG
CTCCACGCCG AGCAGCCCGA GGCGTTCGCA GCTGCCGTGG AGCGGTTCCT GGCGCACGCC
TATCCGGCGC GGTGA
 
Protein sequence
MSEPVQLSLT TRGTGAPLLL LHGLYGSSGN LNRFTRRFAH DYRVLAPDLR NHGRSPHRPG 
MDYPTLTEDV VALLDREGIE RVAVLGHSMG GKVAMTLALT RPQRVAAVIA ADIAPVTYQH
NHGTLIGALQ QVDVAGAGNR REVDAALAAA IDSPAVRQFL LTNLVPADEG GYRWRIPLQF
LADAVPDIQG FPELEGAYDG PALFLYGTAS DYFDPDRHRD AVAAYFPKAE YAALEGAGHW
LHAEQPEAFA AAVERFLAHA YPAR