| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1012 |
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| Symbol | |
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| ID | 4709588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1084526 |
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| End bp | 1085704 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855483 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001002590 |
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| Protein GI | 121997803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.56176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAC GAACCCTGCT ACGAGTGCTG GTGCCCGCCC TGCTGACCGT CGGGCTGATT
CCCATGGCCA TGGCCGACGA GCGCTGGGGC ACCCCCATCG TCGAATCGGT GCCGACGCCG
TCCCCGCCGA GCGTCGGCGC ACCCAGCCAC CTGCTGGTCG ACATGCACAG CGGCTACATC
CTCGCCCACC GCGACCCTGA GGAGAGCTGG GAGCCGGCCA GCCTGGCCAA GATCATGACC
GCCTACGTGG TCTTCGAGGA ACTCGCCTCC GGGCACATCG GGCTTGAGGA CAAGGTCACC
GTCAGCGAGA AGGCCTGGCG CTCCAGCGGC TCGCGGATGT TCCTGGAGGT CGGCACCGAG
GTCACCGTGG CCGAGCTGCT GCAGGGCCTG ATCGTCCAGT CCGGCAACGA CGCCGCGGTC
GCGCTGGCCG AGCACGTGGC CGGCGACGAA GAGACCTTCG CCCAGGTCAT GAACCAGTAC
GCCAGCCGCC TGGGCATGGA CAACACCCAC TACACCAACG CCACGGGCAT GCCCCACGAG
CAGATGCGTA CCACGGCCCA GGATACGGCG CGCCTGGCCC GAGCGATGAT CGATGATTTC
CCCGAGTTCT ACGACTGGTA TTCGCAGCGC TCCTTCGAGT ACGCCGGGAT CAATCAGCAC
AACCGCAACC GTCTGCTGTG GCGGGACGAG ACCGTCGATG GCCTGAAGAC CGGCTACACC
AGCTCCGCCG GCTACAATCT GGTCACCTCC GCCGAGCGCG GCGGCATGCG CCTGATCTCC
GTGGTCCTCG GCACCGAGAG CGAGGACGCT CGGGCACAGC AGAGCCTGCA GCTGCTCAAC
TACGGCTTCC GCTTCTTCGA GACCCACCGA CTCTACAGCG CCGGGGAGCA GCTCACCGAG
GCGCGCGCCT GGATGGGCGA AGGCGACTCG GTGGCCCTGG GCATCCCGGA CAACCTCTAC
GTGACCATCC CGCGCCAGGA ATACGACAAC CTGAGCGCCT CGGTGAGCGT GGACGGCCAG
ATCCGCGCAC CGGTGGAGGC CGGCGCCAAG CTCGGCACCC TGAAGATCGA GCTGGCCGGG
AGCGTCATCC ACGAGGAGCC GCTGATCGCC ATGGAGGATG TCGCAGAGGG CGGCCTGTGG
CGCCGGATGA TCGACCAGGT CTGGCTGCGG TTCGAGTAG
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| Protein sequence | MMRRTLLRVL VPALLTVGLI PMAMADERWG TPIVESVPTP SPPSVGAPSH LLVDMHSGYI
LAHRDPEESW EPASLAKIMT AYVVFEELAS GHIGLEDKVT VSEKAWRSSG SRMFLEVGTE
VTVAELLQGL IVQSGNDAAV ALAEHVAGDE ETFAQVMNQY ASRLGMDNTH YTNATGMPHE
QMRTTAQDTA RLARAMIDDF PEFYDWYSQR SFEYAGINQH NRNRLLWRDE TVDGLKTGYT
SSAGYNLVTS AERGGMRLIS VVLGTESEDA RAQQSLQLLN YGFRFFETHR LYSAGEQLTE
ARAWMGEGDS VALGIPDNLY VTIPRQEYDN LSASVSVDGQ IRAPVEAGAK LGTLKIELAG
SVIHEEPLIA MEDVAEGGLW RRMIDQVWLR FE
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