Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1007 |
Symbol | |
ID | 4709583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1078824 |
End bp | 1079315 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855478 |
Product | rod shape-determining protein MreD |
Protein accession | YP_001002585 |
Protein GI | 121997798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCGGGC ATCGGCCACG CAACGGCGGC GGGATCATCC TGCTCAGCTT CATCATCGCC CTGATGCTGA CCATCGTCCC CATGCCGGGC TGGGCGCAGG AGTTCCGCCC GGAGTGGACG GCGCTGATCC TGCTCTACTG GGGCCTGGCA CTGCCCGAGC GGGTGGGCGT GGGCGTCGGG TGGCTGGTGG GGCTGTTCCA GGACGCCCTG CTCGGGACCC TGCTCGGGCA GCACGCCCTG GCCTTCGCCC TGATCGCCTT CCTGGCCCTG CGGCTGCACC AGCATCTGCG CCTGGTGCCG GTCTGGCAGC AGGCGGTGGT GGTACTCGGG CTACTGGTGG TCGCCCAGCT GGTCGTCTTC TGGATCAACG GCATCATCGG GCGGCCGGCT CCGGAGTGGC AGGCGTGGGC CGCGATCCTG GTCGGCGCTG CCATCTGGCC GTTGGTCTTT CACATCATGA GGGGGGTGCG GCGCCGCTTC CAGGTGCAGT GA
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Protein sequence | MTGHRPRNGG GIILLSFIIA LMLTIVPMPG WAQEFRPEWT ALILLYWGLA LPERVGVGVG WLVGLFQDAL LGTLLGQHAL AFALIAFLAL RLHQHLRLVP VWQQAVVVLG LLVVAQLVVF WINGIIGRPA PEWQAWAAIL VGAAIWPLVF HIMRGVRRRF QVQ
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