Gene Hhal_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1000 
Symbol 
ID4709574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1071781 
End bp1072524 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID639855471 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001002578 
Protein GI121997791 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG AGCAGCTCAT GCGTTACAGC CGGCAGATCA TGCTGCCGGA GCTGGACATC 
ACCGGACAGG AGCGCCTGGC CGCTAGCCGA GCGCTGATCG TCGGCGCCGG GGGGCTGGGA
TCGCCCGTGG CCCTCTACCT CGGCGCGGCG GGCGTTGGAG AGCTGCGCAT CGCCGACGAC
GACGTCGTCG ACCTATCTAA CCTGCAGCGC CAAATCGCCC ACCGGCAGGA CGCCCTCGGC
CAGCCCAAGG CCGCCTCGGC CACCCGGGCC GTCACCGCCC GTAATCCGGA GATCACCGTC
ACCCCCCTGG AGGAGCGCCT GGACGGCGAA CGCCTGGGCG CGGAGGTGGG CGCCGCGGAT
GTGGTCATCG ACGCCACCGA CAACTTCGCC ACCCGCTTCG CCCTGAACGC CGCCTGCGTA
GCGGCCCACC GCCCCCTGGT CAGCGCCGCG GTGATCCGCT GGGAGCTGCA GGTGTCCGCC
TTCCGGCCCG GCGGGCGCCC CTGCTACCGC TGCATCTACG CCGAGGGGGA TGAGCCGCAG
TTGACCTGCA GTGAGAGCGG GGTCCTGGGC CCGCTGCCCG GCGTTGCCGG GAGCCTGGAG
GCGGTCGAGG CGATCAAGAT CCTCACCGGC GCCGGTACTC CTCTCTTCGG CCGCCTGCTG
GTGGTCGACG CGCTACGTAT GCGCCTGCGC ACGCTGACAG TCAACGGCGA CCCGCACTGC
CCGGTCTGTG CCGAGGCCCC CTAG
 
Protein sequence
MNDEQLMRYS RQIMLPELDI TGQERLAASR ALIVGAGGLG SPVALYLGAA GVGELRIADD 
DVVDLSNLQR QIAHRQDALG QPKAASATRA VTARNPEITV TPLEERLDGE RLGAEVGAAD
VVIDATDNFA TRFALNAACV AAHRPLVSAA VIRWELQVSA FRPGGRPCYR CIYAEGDEPQ
LTCSESGVLG PLPGVAGSLE AVEAIKILTG AGTPLFGRLL VVDALRMRLR TLTVNGDPHC
PVCAEAP