| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0974 |
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| Symbol | |
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| ID | 4709503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1046046 |
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| End bp | 1047644 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855443 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001002552 |
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| Protein GI | 121997765 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA ACGAACCCGT TACGCAGCGC AGGGTGGCTG TCCCCCGAGG CGCCACCATC
CTCTCGACCA CCGACCCGAA GGGGCGGATC ACCTACGTCA ACGAGGAGTT CGAGCGGATC
AGCGGCTACC GCCACGATGA GCTCATCGGA CAACCGCACA ACCTGATTCG CCACCCGGAC
ATGCCGCGCA CGGCATTCTA CGAGATGTGG GCCACGCTGC AATCCGGACG CTCCTGGATG
GGCCTGGTCA AGAACCGCTG CAAGAACGGC GACCACTACT GGGTCCACGC CTACGCGACC
CCGATTCTCG ACGCCCGGGG AACCATCGTC GAGATCCAGT CGGTCCGCAC CGCACCCCCC
TCCGAGGCGG CGGTGGAACG CGCGGCGGCC ACCTACGCCA AGGTCCGCGC CAGCGAACCG
GACAAGGGCG AGGTTGGTCC GGTGCCGCGC CCGGGGCGCC GCTTCGGACT GCGCGAACGG
CTGCTCGCCC TGCTCCTGCC GGCGCCTGTG GCCGCGGTGG TGGCCAGCAC CGCCGGACTG
GGCACCGCGG GCCTGGCGCT GGTCACCCTG ACCGCCACGG CACTGGCCGC CGGCGGTGCC
GTCTACCTGT GGCGCCCCCT GAACGCCGCG GTGGAAGAGG CCCGGCTGCT GATCGACGAC
CCGCTAGCCG AACAGCTCTA CACCAACCGT CGGGACGAAG CCGGCCGCCT GCGGCTGGCC
ATGCTCCAGC TGCAGACCGA GATGAGCGCC GTGCCCAAGC GTCTGGCCAG CGTCACCGAG
CAGCTGCAGA CGGTCCGCAA CCAGGCCGGC GAGGCCATCG GCGAGGCGCG CAGTCAGGCC
CAGCGGCAGA CGTCCGAGAC CCAGCAGGTG GCCACCGCCA TGGAGGAGAT GTCCCAGAGC
GTCCAGGAGG TGGCCCGCAA CGCCTCCATG GGGGCCGAGA CCAGCGAGCA GGCGCAGACC
CAGACCCACC ACGGCATGCA AACGGTGCAG CAGAGCGCCG ACGCCGTCCG CGAACTGGTC
GAGCGGGTGC GCGGCTCCGC GGAGATCACC CATCAGCTGG CCCAGGAGAC CGACCGCATC
GGTGCGGCCC TGGACCTGAT CCAGCAGATC ACCGAGCAGA CCAACCTGCT GGCGCTCAAC
GCGGCCATCG AGGCAGCCCG CGCCGGCGAG GTCGGCCGCG GCTTCTCGGT GGTGGCCGAG
GAGGTCCGGG TCCTCGCCGA CCGCACCTCG TCCTCGACCA AGGAGATCAA GGCGATCATC
GACTCCCTGC AGGAGGGCAC CGAGCGCGCG GTGGCCGCCA TGAACGAGAG CAGCGAGCGC
GCCGAGCACA CCCTCAACCT CTCCGACGAG GCCCGCGGGG CACTCGAGGC GATCAACGAG
GCGGTCTCCT CCATGCAGGA GATGAGCATA CAGATCGCCA GCGCCACCGA GGAGCAGAGT
GCCACCGCCG GGGAGGTGAA CCGCAATATC AACAACATCG ACCAGCTCGC CCAGCAGGTG
CAGGAGTGCA CCGACCGCGC CGGCGACCGG ATGGAGACCC TGACGGAAGA GATCGACCAC
GCCGCACGCC TGGTGCGCCG CTTTGCCGAC CAGCAATAA
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| Protein sequence | MRINEPVTQR RVAVPRGATI LSTTDPKGRI TYVNEEFERI SGYRHDELIG QPHNLIRHPD
MPRTAFYEMW ATLQSGRSWM GLVKNRCKNG DHYWVHAYAT PILDARGTIV EIQSVRTAPP
SEAAVERAAA TYAKVRASEP DKGEVGPVPR PGRRFGLRER LLALLLPAPV AAVVASTAGL
GTAGLALVTL TATALAAGGA VYLWRPLNAA VEEARLLIDD PLAEQLYTNR RDEAGRLRLA
MLQLQTEMSA VPKRLASVTE QLQTVRNQAG EAIGEARSQA QRQTSETQQV ATAMEEMSQS
VQEVARNASM GAETSEQAQT QTHHGMQTVQ QSADAVRELV ERVRGSAEIT HQLAQETDRI
GAALDLIQQI TEQTNLLALN AAIEAARAGE VGRGFSVVAE EVRVLADRTS SSTKEIKAII
DSLQEGTERA VAAMNESSER AEHTLNLSDE ARGALEAINE AVSSMQEMSI QIASATEEQS
ATAGEVNRNI NNIDQLAQQV QECTDRAGDR METLTEEIDH AARLVRRFAD QQ
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