Gene Hhal_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0906 
Symbol 
ID4709687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp980761 
End bp981306 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID639855375 
Productlactoylglutathione lyase 
Protein accessionYP_001002484 
Protein GI121997697 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCC ACTTCGACGC CGCTGCCGGC CTGTGCGAGC AGCCCGAGCC GGAGACCGCC 
GGATTCAAGC TCAACCACAC CATGCTGCGC ATCAAGGACC CGCAGCGCTC CCTGGACTTC
TACACCCGGG TGCTGGGCAT GCGCCTGGTG CGCCGCCTGG ACTTCGAGGA GATGCGCTTC
ACGCTCTACT TCCTCGCCTT CCTCGACGAC CAGCAAGCCG CCGAGGTCCC CGCCGAGGAC
GGCCCGCGAA CCACCTGGAA CTTCGGCCGC GAGGGGGTGC TGGAGCTGAC TCACAACTGG
GGCGACGAGA ACGACCCCGA GGTCGCCTTC CACGACGGCA ACAGCGAGCC GAAGGGTTTC
GGCCACATCG CCATCTCGGT CCCCGACGTC TACAGCGCCT GTGAGCGCTT CGAGACGCTG
CAGGTGGACT TCGTCAAACG CCCCCAGGAC GGCAAGATGC AGGGCATCGC CTTTATCCGC
GACCCGGACG GCTACTGGAT CGAGGTGGTC CAGCCCGACC TGCTCGAACG CCAGGGGATC
GGCTGA
 
Protein sequence
MSRHFDAAAG LCEQPEPETA GFKLNHTMLR IKDPQRSLDF YTRVLGMRLV RRLDFEEMRF 
TLYFLAFLDD QQAAEVPAED GPRTTWNFGR EGVLELTHNW GDENDPEVAF HDGNSEPKGF
GHIAISVPDV YSACERFETL QVDFVKRPQD GKMQGIAFIR DPDGYWIEVV QPDLLERQGI
G