| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0884 |
|---|
| Symbol | |
|---|
| ID | 4710098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 961250 |
|---|
| End bp | 963517 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639855353 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
|---|
| Protein accession | YP_001002462 |
|---|
| Protein GI | 121997675 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAA TCCTCCACCG CGTCTCCCGA GAAGTGAACG CCGCCCCGAA CCTGCGCCAG
GGGCTGCGGA TCATCGTCGA GCGGGTCGCC GATGCCATGG CGGTGGATGT CTGCTCGGTG
TACCTCCTCG ACGCCACCCA GGGCGACTTC GTCCTCATGG ACACCCGTGG CCTGAACACC
GAGTCGGTGG GCCGCGTACG CCTGACCTCC GCCGAGGGGC TGGTGGGCCT GGTGGCCGAG
CGCGAGGAGC CGATCAACCT CAAGAACGCC CCGGCGCACT CGCGGTTTCG CTACTTCCCC
GAGACCGGCG AGGAGCGCTA CTCCTCCTTT CTCGGGGTGC CCATCATCCA CTACCGCTCG
GTGCTCGGTG TGCTGGTGGT CCAGCAGGCC GAAGAGCGCC GCTTCGAGGA GAACGAGGTC
GCCTTCCTGG TCACCCTGGC GGCGCAGCTG GCCGGGGCGA TCGCCCACGC CCGGGCCAGC
GGCGGGATCC ACGACATCGG CGACGAGCCG GTGGCCGGGG ACAGTCGCGC CCTGCGCGGT
CTGCCCGGGG CCCCGGGGGT GGCCATCGGC ACGGCGGTGG TCCCCTATGC CCAGTCGGAC
CTCAACGCCA TCCCCGATCG TACGGCCGCC GACCCCGAGG CCGAGGTGGC GACCTTCGAG
GCCGCCGTCG ACCAGGTCAC CGCCGAGCTG CGCCAGCTCG GCCAGCAGAT CTCCGGCTCG
GTCAGCGCCG ACGAGCAGAT GCTCTTCGAT GTCTATCTGC GCATGCTCGA AGGCGATAGC
CTGGTCAGCG AGACCGTCGA GCGCATCCGC GCCGGCAACT GGGCGCCCGG CGCGTTGCGC
CAGGTCATCG GGGAGCACGT GCAGGTCTTC GAGAACATGG ACGACCCCTA CCTGCGCGAG
CGGGCCAGCG ACATCCGCGA CCTTGGGCGG CGGATCCTCG GGCGCCTGCG CGATGAGGGC
GGACGGGTGG AGGACCTGCC CGAGAAGGCC GTGTTGGTCG GCCACGAGGT CAGCGCCTCG
CAACTGGCCG AGATCCCCAG TGATCGGCTG GTCGGTGTTG TCTCGGCGAC CGGTTCGCGC
AACTCCCACG TGGCCATCCT CGCCCGCGCC CTGGGTATCC CGGCGGTGAT GGGGGTGGAC
GACCTGCGGA CCCGGAAGAT GGACGGCCGG CCGGTGGTGG TCGACGGCTA CGCGGGGCGC
TTCTACGTCG ATCCCACGGA GACCGTGGAG CAGGAGTATC AGCGCCTGAT CCGCGACGAG
GCGGAGTTCA CCGAAGGGCT CGAGGCGGTG CGCGACGAGC CGGCGATCAG CCCCGACGGC
CGCAACCTGG CCCTCTACGC CAACACCGGC CTGATCTCCG ATATCAATCT GTCGCTGGCG
GCCGGTTGTG ACGGCATCGG GCTGCACCGC ACCGAGTTCC CGTTCCTGAT CCGTGACCGC
TTCCCGGGCG AAGAGGAGCA GGCTGACCTC TACCGCCGGG TGCTGGAGCA GTTCGCACCG
AAGCCCGTCA CCCTGCGTAC CCTGGATGTC GGCGGCGACA AGTCGCTGGC CTACTTCCCC
ATCGAGGAAG AGAACCCCTT CCTCGGTTGG CGGGGGATCC GCCTGACCCT GGACCACCCG
GAGATCTTCC TCACCCAGCT GCGCGCCATG CTGCGCGCCG ACGTTGGCCT GGGGAATCTG
CAGATCCTCC TGCCCATGGT CAGTCGCCTG GAGGAGATCG CCGACGTGCG TCGGCTGTTG
CTGCGCGCCC GCCAGGAGCT GGCCGAGGAG GGCATCCAGG CGCGCATCCC GCCCCTGGGC
GTGATGATCG AGGTGCCTGC CACCATCTAC CAGATCGATC GCTACTGCGA TCAGGCCGAC
TTCCTCTCCC TCGGCTCCAA CGACCTGACC CAGTACCTGC TGGCTGTGGA TCGCAACAAC
AGCCGCGTGG CCGGGCTCTA CGACGAGCTG CACCCGGCCG TGCTCGGCGC GGTGCAGCAC
GTGGCCCAGG CGGCGCGGCG CCACGGCAAA CGTCTGACCG TCTGCGGCGG CATGGCCGGC
GATCCGGCCG GGGCCATCCT GCTCATGGGC TTCGGCATCG AAGGGTTATC GATGAGCGTC
TCGAGCCTGC TGCGCATCAA GTGGGTGGTG CGCCGCGTGC CCGTCCGGCG CGCCGCCGAG
CTGGCCAACC GGGCCGTCGA GATGGACTCC CCCGAGGAGG TGCGCCGCAT GCTCCGCCGT
ACCCTGGAGG AGTACGAGCT CGGCGGCCTC ATGCGGGCGG GCAAGTAA
|
|---|
| Protein sequence | MLEILHRVSR EVNAAPNLRQ GLRIIVERVA DAMAVDVCSV YLLDATQGDF VLMDTRGLNT
ESVGRVRLTS AEGLVGLVAE REEPINLKNA PAHSRFRYFP ETGEERYSSF LGVPIIHYRS
VLGVLVVQQA EERRFEENEV AFLVTLAAQL AGAIAHARAS GGIHDIGDEP VAGDSRALRG
LPGAPGVAIG TAVVPYAQSD LNAIPDRTAA DPEAEVATFE AAVDQVTAEL RQLGQQISGS
VSADEQMLFD VYLRMLEGDS LVSETVERIR AGNWAPGALR QVIGEHVQVF ENMDDPYLRE
RASDIRDLGR RILGRLRDEG GRVEDLPEKA VLVGHEVSAS QLAEIPSDRL VGVVSATGSR
NSHVAILARA LGIPAVMGVD DLRTRKMDGR PVVVDGYAGR FYVDPTETVE QEYQRLIRDE
AEFTEGLEAV RDEPAISPDG RNLALYANTG LISDINLSLA AGCDGIGLHR TEFPFLIRDR
FPGEEEQADL YRRVLEQFAP KPVTLRTLDV GGDKSLAYFP IEEENPFLGW RGIRLTLDHP
EIFLTQLRAM LRADVGLGNL QILLPMVSRL EEIADVRRLL LRARQELAEE GIQARIPPLG
VMIEVPATIY QIDRYCDQAD FLSLGSNDLT QYLLAVDRNN SRVAGLYDEL HPAVLGAVQH
VAQAARRHGK RLTVCGGMAG DPAGAILLMG FGIEGLSMSV SSLLRIKWVV RRVPVRRAAE
LANRAVEMDS PEEVRRMLRR TLEEYELGGL MRAGK
|
|---|
| |