Gene Hhal_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0880 
Symbol 
ID4710267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp958676 
End bp959710 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID639855349 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_001002458 
Protein GI121997671 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.272796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG TAGGCATAGT CGGCGGTACC GGATACACCG GTATGGAGCT GCTGCGCCTG 
GTGGCCCGCC ACCCCAAGCT GCGGTTGGCG GAGATTACCT CGCGGGCCGA GGCCGGGACG
CGCGTCGACG AGCTGGTGCC GGCACTTGAG GGGGCCGTCG ACAACGTCTT CACCGCCCCG
GATACCGAGC GCCTGAGCCG GTGCGATGTG GTCTTCTTCG CCACGCCCAA CGGCATCGCC
ATGGAGTCGG CGCCGGCGCT GCTCGAGGCC GGCTGCCGGG TCATCGATCT GGGGGCCGAC
TTCCGGCTGC GCGACCCGGC GGTCTGGACC GAGTGGTACG GCATGAGTCA CAGCTGCCCC
GAGTTGCTTG AGGAGGCCGT CTACGGCCTG CCGGAGGCCA ACCGCGATGC CCTGCCCGGG
GCGCGACTGG TTGCCAACCC GGGCTGTTAC CCCACCGCCG TGGCGCTGGG GCTGCTGCCG
TTGCTCGAGG CCGGGGCGCT GGCCGATGGG CCGGTGGTTG CCGATTGCAA GTCCGGGGTC
TCCGGTGCCG GGCGGGCGGC CAAGGTGGCC ACGCTGTTCT GCGAGGCCAA CGAGGGGTTC
AAGGCCTACG GCGCCAGTGG CCATCGCCAC CTGCCGGAGA TCGAGCAGAC CCTGGCCCGG
GTGGCCGGCG CGCCGGTGGA CGTGACCTTC GTCCCGCATC TGGTGCCCAT GACCCGGGGT
ATGCAGGCCA CCCTGCACGT CGTCGTGGAC CGCCCGCTGG ACGAGCTCGA GGCCCTCTAC
CGGCAGCGCT ATGCCGACGA GCCCTTCGTG CATCTGGTCG CCTCCGGGGG GCACCCCGAG
ACGCGCTGGG TGCGCGGGAC CAACCACTGC CGGATCGGCC TGCACCAGCC GCCGGGGCGT
CCCGACCGGG CGGTGATCCT GTCGGTGATC GACAACCTCA CCAAGGGCGC AGCCGGGCAG
GCGGTGCAGA ACCTCAACCG GATGTTCGGC CTGGAGGAGA CCGCCGGGCT CGAGGGGCTG
GCCTACGTGC CGTAG
 
Protein sequence
MIEVGIVGGT GYTGMELLRL VARHPKLRLA EITSRAEAGT RVDELVPALE GAVDNVFTAP 
DTERLSRCDV VFFATPNGIA MESAPALLEA GCRVIDLGAD FRLRDPAVWT EWYGMSHSCP
ELLEEAVYGL PEANRDALPG ARLVANPGCY PTAVALGLLP LLEAGALADG PVVADCKSGV
SGAGRAAKVA TLFCEANEGF KAYGASGHRH LPEIEQTLAR VAGAPVDVTF VPHLVPMTRG
MQATLHVVVD RPLDELEALY RQRYADEPFV HLVASGGHPE TRWVRGTNHC RIGLHQPPGR
PDRAVILSVI DNLTKGAAGQ AVQNLNRMFG LEETAGLEGL AYVP