Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0846 |
Symbol | rplE |
ID | 4710793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 921381 |
End bp | 921920 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639855305 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001002424 |
Protein GI | 121997637 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.85914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGT TGCGAAAGGT TTATCGGGAA GAGGTCACCC CGGCCCTCAA AGAGCGCTTC GGGTACCAGA ACGTCATGCA GGTGCCCCAG CTGCAGAAGA TCGTCATCAA CATGGGTCTG GGTGAGGCCA CCAAGGACAA GAAGATCCTG GAGGCCGCGC AGGAGGATCT GGCCAAGATC GCCGGGCAGA AGCCAGTGGT GACCCGCGCT CGCAAGTCGG TGGCCGGGTT CAAGATCCGT GAGGGCTGGC CAATCGGCTG CAAGGTGACG CTGCGCCGCG ATCGGATGTA CGAGTTCCTC GAGCGCTTCA TCCACGTGGC CTCCCCGCGG GTCCGCGACT TCCGTGGGTT CTCGCCGCGG TCGTTCGACG GGCGGGGCAA CTACAACCTC GGTATCCGGG AGCAACTGAT CTTCCCGGAG ATCGACTACG ACGAAATCGA TCGGGTGCGC GGCATGGACA TCACCGTGTC CACCACCGCT CGCACCGACG CGGAAGGGAA GGCCCTGCTC GAAGGGTTCG GCTTTCCCTT CCGGACCTGA
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Protein sequence | MATLRKVYRE EVTPALKERF GYQNVMQVPQ LQKIVINMGL GEATKDKKIL EAAQEDLAKI AGQKPVVTRA RKSVAGFKIR EGWPIGCKVT LRRDRMYEFL ERFIHVASPR VRDFRGFSPR SFDGRGNYNL GIREQLIFPE IDYDEIDRVR GMDITVSTTA RTDAEGKALL EGFGFPFRT
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